RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ZSWIM6Q9HCJ5 1215 aa23.24■■□□□ 1.31
LTBR-205ENST00000535739 TLR9Q9NR96 1032 aa23.24■■□□□ 1.31
LTBR-205ENST00000535739 RNF19AQ9NV58 838 aa23.24■■□□□ 1.31
LTBR-205ENST00000535739 EIF4BP23588 611 aaKnown RBP23.23■■□□□ 1.31
LTBR-205ENST00000535739 SFNP31947 248 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 TRIM22Q8IYM9 498 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 SMRP1Q8NCR6 262 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 CASD1Q96PB1 797 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 MUTYHQ9UIF7 546 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 PCDHA4Q9UN74 947 aa23.23■■□□□ 1.31
LTBR-205ENST00000535739 TDP2O95551 362 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 ZSCAN20P17040 1043 aaPredicted RBP23.22■■□□□ 1.31
LTBR-205ENST00000535739 GPC3P51654 580 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 JAK3P52333 1124 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 RBM10P98175 930 aaKnown RBP23.22■■□□□ 1.31
LTBR-205ENST00000535739 COASYQ13057 564 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 Q4G0T1 1027 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 LRRC55Q6ZSA7 311 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 RNF135Q8IUD6 432 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 TMEM117Q9H0C3 514 aa23.22■■□□□ 1.31
LTBR-205ENST00000535739 TECTAO75443 2155 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 PSMD10O75832 226 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 LAG3P18627 525 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 FGFR4P22455 802 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 TBC1D8BQ0IIM8 1120 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 MIER3Q7Z3K6 550 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 ECHDC2Q86YB7 292 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 SCLT1Q96NL6 688 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 AIFM3Q96NN9 605 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 CYP46A1Q9Y6A2 500 aa23.21■■□□□ 1.31
LTBR-205ENST00000535739 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 CPLX1O14810 134 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 FSCN2O14926 492 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 DARSP14868 501 aaKnown RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 HOXD11P31277 338 aaPredicted RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 STK3Q13188 491 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 DRP2Q13474 957 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 TARBP2Q15633 366 aaKnown RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 BLIDQ8IZY5 108 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 ZNF710Q8N1W2 664 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 RNF169Q8NCN4 708 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 VN1R2Q8NFZ6 395 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 ZNF274Q96GC6 653 aaPredicted RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 C22orf23Q9BZE7 217 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 SEPT9Q9UHD8 586 aaPredicted RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 USP15Q9Y4E8 981 aaPredicted RBP23.2■■□□□ 1.3
LTBR-205ENST00000535739 ZNF318Q5VUA4 2279 aa23.2■■□□□ 1.3
LTBR-205ENST00000535739 CYP3A7-CYP3A51PA0A087WV96 503 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 M0R2N6 131 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 HOXA2O43364 376 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 CSDE1O75534 798 aaKnown RBP23.19■■□□□ 1.3
LTBR-205ENST00000535739 DEXIO95424 95 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 CYP3A7P24462 503 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 PBX3P40426 434 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 NPY5RQ15761 445 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 DUSP6Q16828 381 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 MTERF2Q49AM1 385 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 HERC4Q5GLZ8 1057 aaPredicted RBP23.19■■□□□ 1.3
LTBR-205ENST00000535739 PLPP4Q5VZY2 271 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 KCNT2Q6UVM3 1135 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 ABI1Q8IZP0 508 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 RDM1Q8NG50 284 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 NLRP7Q8WX94 980 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 MRPS27Q92552 414 aaKnown RBP23.19■■□□□ 1.3
LTBR-205ENST00000535739 SH2D3AQ9BRG2 576 aa23.19■■□□□ 1.3
LTBR-205ENST00000535739 STBD1O95210 358 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 PLCB3Q01970 1234 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 CLLU1OSQ5K130 101 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 PDE12Q6L8Q7 609 aaKnown RBP23.18■■□□□ 1.3
LTBR-205ENST00000535739 B3GNT9Q6UX72 402 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 CEP89Q96ST8 783 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 CDCA3Q99618 268 aaPredicted RBP23.18■■□□□ 1.3
LTBR-205ENST00000535739 NIFKQ9BYG3 293 aaKnown RBP23.18■■□□□ 1.3
LTBR-205ENST00000535739 LZTS1Q9Y250 596 aa23.18■■□□□ 1.3
LTBR-205ENST00000535739 PIEZO1Q92508 2521 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
LTBR-205ENST00000535739 XKR3Q5GH77 459 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 HFE2Q6ZVN8 426 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 LRRC43Q8N309 656 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 DAGLBQ8NCG7 672 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 ETNPPLQ8TBG4 499 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 MBOAT7Q96N66 472 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 ZNF558Q96NG5 402 aa23.17■■□□□ 1.3
LTBR-205ENST00000535739 PUF60Q9UHX1 559 aaKnown RBP23.17■■□□□ 1.3
LTBR-205ENST00000535739 A0A0U1RQF3 1178 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 LOC730098B7Z3J9 87 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 ZNF598Q86UK7 904 aaKnown RBP23.16■■□□□ 1.3
LTBR-205ENST00000535739 HELQQ8TDG4 1101 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 TCF25Q9BQ70 676 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 TM6SF1Q9BZW5 370 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 ENTPD7Q9NQZ7 604 aa23.16■■□□□ 1.3
LTBR-205ENST00000535739 DDX11L8A8MPP1 907 aa23.15■■□□□ 1.3
LTBR-205ENST00000535739 HIDE1A8MVS5 230 aa23.15■■□□□ 1.3
LTBR-205ENST00000535739 ATF7P17544 494 aaPredicted RBP23.15■■□□□ 1.3
LTBR-205ENST00000535739 NONOQ15233 471 aaKnown RBP eCLIP23.15■■□□□ 1.3
LTBR-205ENST00000535739 INF2Q27J81 1249 aa23.15■■□□□ 1.3
LTBR-205ENST00000535739 CPLX2Q6PUV4 134 aaKnown RBP23.15■■□□□ 1.3
LTBR-205ENST00000535739 MOXD1Q6UVY6 613 aa23.15■■□□□ 1.3
LTBR-205ENST00000535739 GCOM2Q9BZD3 368 aaPredicted RBP23.15■■□□□ 1.3
LTBR-205ENST00000535739 SPG21Q9NZD8 308 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms