RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ANKRD13CQ8N6S4 541 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 KCNG4Q8TDN1 519 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 SMCR8Q8TEV9 937 aaPredicted RBP6.94□□□□□ -1.3
CMTM1-220ENST00000534143 NAP1L4Q99733 375 aaKnown RBP6.94□□□□□ -1.3
CMTM1-220ENST00000534143 PORCNQ9H237 461 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 TMEM60Q9H2L4 133 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 MROH8Q9H579 483 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 CYP39A1Q9NYL5 469 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 PCDHA7Q9UN72 937 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 PLXNB2O15031 1838 aa6.94□□□□□ -1.3
CMTM1-220ENST00000534143 CENPFP49454 3210 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 IGLV3-22A0A075B6J6 115 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 TNRC18O15417 2968 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 CCNT1O60563 726 aaKnown RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 CUTAO60888 179 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 TDP2O95551 362 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 MARCKSP29966 332 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 MAP2K2P36507 400 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 CHRNA4P43681 627 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 CCNA1P78396 465 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 IL17AQ16552 155 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 Q4G0T1 1027 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PRRT3Q5FWE3 981 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 ARL6IP4Q66PJ3 421 aaKnown RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 ADALQ6DHV7 355 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PSAPL1Q6NUJ1 521 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 FAM133AQ8N9E0 248 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 LENG9Q96B70 501 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 FGD4Q96M96 766 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 MTMR9Q96QG7 549 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PDCD2LQ9BRP1 358 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 EHMT1Q9H9B1 1298 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 JPH1Q9HDC5 661 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PXMP2Q9NR77 195 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 STIM2Q9P246 746 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 CPA4Q9UI42 421 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 FBXO2Q9UK22 296 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 SRPRBQ9Y5M8 271 aaKnown RBP6.93□□□□□ -1.3
CMTM1-220ENST00000534143 UBIAD1Q9Y5Z9 338 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 MGAMO43451 1857 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PLXNA1Q9UIW2 1896 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 ASTN1O14525 1302 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 PFASO15067 1338 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 KIAA1217Q5T5P2 1943 aa6.93□□□□□ -1.3
CMTM1-220ENST00000534143 FAM237AA0A1B0GTK4 181 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 A0A1W2PQ27 194 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 A0A1W2PQ64 194 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 A0A1W2PQD8 194 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FAM86B1E9PN63 330 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 MEIS1O00470 390 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 LAD1O00515 517 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 STRNO43815 780 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 SLC37A4O43826 429 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 NEMFO60524 1076 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FAM86B2P0C5J1 330 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FCER1AP12319 257 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 PRPHP41219 470 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 ME1P48163 572 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 UBE2HP62256 183 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 UBXN2AP68543 259 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 GPLD1P80108 840 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 MRPS9P82933 396 aaKnown RBP6.92□□□□□ -1.3
CMTM1-220ENST00000534143 CNTN2Q02246 1040 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 GRIN1Q05586 938 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 CRHR2Q13324 411 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 PGM5Q15124 567 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 XRRA1Q6P2D8 792 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 NIPA1Q7RTP0 329 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 MTERF4Q7Z6M4 381 aaKnown RBP6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FAM35AQ86V20 835 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 ABRAQ8N0Z2 381 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 ANKRD35Q8N283 1001 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 DNERQ8NFT8 737 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 CYP2W1Q8TAV3 490 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
CMTM1-220ENST00000534143 HAS1Q92839 578 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FERMT2Q96AC1 680 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 ABHD8Q96I13 439 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 CLIC6Q96NY7 704 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 RMDN3Q96TC7 470 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 MMP19Q99542 508 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 MXRA8Q9BRK3 442 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 KCNMB3Q9NPA1 279 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 FRRS1LQ9P0K9 344 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 DDX25Q9UHL0 483 aaKnown RBP6.92□□□□□ -1.3
CMTM1-220ENST00000534143 BRCA2P51587 3418 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
CMTM1-220ENST00000534143 LRRC37A2A6NM11 1700 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 LOC102724159A0A0B4J2E5 919 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms