RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 KDM3AQ9Y4C1 1321 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 MYH9P35579 1960 aaKnown RBP14.93□□□□□ -0.02
CMTM1-219ENST00000533953 E9PMD0 336 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 LAD1O00515 517 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 USO1O60763 962 aaKnown RBP14.93□□□□□ -0.02
CMTM1-219ENST00000533953 SRGAP2CP0DJJ0 459 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 RFC5P40937 340 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 DNM2P50570 870 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 SPECC1Q5M775 1068 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 PNMA5Q96PV4 448 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 SLC9A7Q96T83 725 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 ZBED2Q9BTP6 218 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 SEMA6BQ9H3T3 888 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 MSRAQ9UJ68 235 aa14.93□□□□□ -0.02
CMTM1-219ENST00000533953 AMHP03971 560 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 RPLP2P05387 115 aaKnown RBP14.92□□□□□ -0.02
CMTM1-219ENST00000533953 CA3P07451 260 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
CMTM1-219ENST00000533953 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
CMTM1-219ENST00000533953 LAMTOR4Q0VGL1 99 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 USP49Q70CQ1 688 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 PHOSPHO2Q8TCD6 241 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 ASAP3Q8TDY4 903 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
CMTM1-219ENST00000533953 CLIC6Q96NY7 704 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 MTRQ99707 1265 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 CERS4Q9HA82 394 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 EVPLQ92817 2033 aa14.92□□□□□ -0.02
CMTM1-219ENST00000533953 TLL1O43897 1013 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 XRCC6P12956 609 aaKnown RBP eCLIP14.91□□□□□ -0.02
CMTM1-219ENST00000533953 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
CMTM1-219ENST00000533953 GRB10Q13322 594 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 GRIN2CQ14957 1233 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 ARL6IP4Q66PJ3 421 aaKnown RBP14.91□□□□□ -0.02
CMTM1-219ENST00000533953 PADI6Q6TGC4 694 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 LRRC15Q8TF66 581 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 APBB2Q92870 758 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 ADAM2Q99965 735 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 RAB34Q9BZG1 259 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-219ENST00000533953 MINDY3Q9H8M7 445 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
CMTM1-219ENST00000533953 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 PCDHA11Q9Y5I1 949 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 SQORQ9Y6N5 450 aa14.91□□□□□ -0.02
CMTM1-219ENST00000533953 WDR81Q562E7 1941 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 ARHGEF35A5YM69 484 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 RFXAPO00287 272 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 GPR182O15218 404 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 EFCAB14O75071 495 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 GJB5O95377 273 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 F13A1P00488 732 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 ARL2P36404 184 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 GATMP50440 423 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 RAB30Q15771 203 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 ZNF697Q5TEC3 545 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 HAUS3Q68CZ6 603 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 CABP7Q86V35 215 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 RNF149Q8NC42 400 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 PSPC1Q8WXF1 523 aaKnown RBP14.9□□□□□ -0.02
CMTM1-219ENST00000533953 TOP1MTQ969P6 601 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 JPH2Q9BR39 696 aaPredicted RBP14.9□□□□□ -0.02
CMTM1-219ENST00000533953 GCOM2Q9BZD3 368 aaPredicted RBP14.9□□□□□ -0.02
CMTM1-219ENST00000533953 CSRNP2Q9H175 543 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
CMTM1-219ENST00000533953 ZNF576Q9H609 170 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 ATP6V0A4Q9HBG4 840 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 IFT122Q9HBG6 1241 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 MTMR10Q9NXD2 777 aa14.9□□□□□ -0.02
CMTM1-219ENST00000533953 FBXO2Q9UK22 296 aaPredicted RBP14.9□□□□□ -0.02
CMTM1-219ENST00000533953 SIP14410 1827 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 DGAT1O75907 488 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 SSBP05455 408 aaKnown RBP eCLIP14.89□□□□□ -0.03
CMTM1-219ENST00000533953 GLRA2P23416 452 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 DSC3Q14574 896 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 FAM102BQ5T8I3 360 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 BSNDQ8WZ55 320 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 EPSTI1Q96J88 318 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 GUCD1Q96NT3 240 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 SLC28A3Q9HAS3 691 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 DNM3Q9UQ16 869 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 PPME1Q9Y570 386 aa14.89□□□□□ -0.03
CMTM1-219ENST00000533953 DENND3A2RUS2 1198 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 BMP15O95972 392 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 CYP11B2P19099 503 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 TAP1Q03518 808 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 RAD51AP2Q09MP3 1159 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 CAPSQ13938 189 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 DHX8Q14562 1220 aaKnown RBP14.88□□□□□ -0.03
CMTM1-219ENST00000533953 SLC39A14Q15043 492 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 KARSQ15046 597 aaKnown RBP14.88□□□□□ -0.03
CMTM1-219ENST00000533953 PPP2R2DQ66LE6 453 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 CDX2Q99626 313 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-219ENST00000533953 RAD9AQ99638 391 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms