RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 PPP1R35Q8TAP8 253 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 PIBF1Q8WXW3 757 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 LBHD1Q9BQE6 289 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 DDX23Q9BUQ8 820 aaKnown RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 TRIM7Q9C029 511 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 NKIRAS2Q9NYR9 191 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TBC1D29Q9UFV1 150 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 ARHGAP10A1A4S6 786 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 PRAMEF22A3QJZ6 481 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 CTAGE9A4FU28 777 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 GRIN3BO60391 1043 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TYRP1P17643 537 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 RHCEP18577 417 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 CAP2P40123 477 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 POLD2P49005 469 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 GJA9P57773 515 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 RHDQ02161 417 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 PDE12Q6L8Q7 609 aaKnown RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 TTC6Q86TZ1 520 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 BBOF1Q8ND07 529 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 SHC3Q92529 594 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 CAPS2Q9BXY5 557 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 SH2B1Q9NRF2 756 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 C14orf119Q9NWQ9 140 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 POLR3GO15318 223 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 PEX2P28328 305 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 GTF2A1P52655 376 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 IRX5P78411 483 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 DGKZQ13574 1117 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 AMOTQ4VCS5 1084 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 RALYLQ86SE5 291 aaKnown RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 SPATA9Q9BWV2 254 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 SCAND2PQ9GZW5 306 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 RNF38Q9H0F5 515 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 MMADHCQ9H3L0 296 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 RASSF1Q9NS23 344 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 CPSF2Q9P2I0 782 aaKnown RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 PRR36Q9H6K5 1346 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 KLRG2A4D1S0 409 aaPredicted RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 PDHBP11177 359 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 IFNAR2P48551 515 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CDR1P51861 262 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 IL1RL1Q01638 556 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 GALEQ14376 348 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 Q6ZUG5 572 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 PPM1KQ8N3J5 372 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 AHCYL2Q96HN2 611 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 C7orf25Q9BPX7 421 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 TRIT1Q9H3H1 467 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 STRN4Q9NRL3 753 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 DNM3Q9UQ16 869 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 MTMR6Q9Y217 621 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 ATP6V0A2Q9Y487 856 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 RAD50Q92878 1312 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 ZNF891A8MT65 544 aaPredicted RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 PRKD3O94806 890 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 EOMESO95936 686 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 SERPINC1P01008 464 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 PDGFAP04085 211 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 TNFSF4P23510 183 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 PPM1AP35813 382 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CD86P42081 329 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 KIAA0319Q5VV43 1072 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 IGF2-ASQ6U949 168 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 AVL9Q8NBF6 648 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CFAP36Q96G28 342 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 LMAN2LQ9H0V9 348 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CCDC68Q9H2F9 335 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 IFT22Q9H7X7 185 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 TNPO3Q9Y5L0 923 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 PIK3R4Q99570 1358 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 TXNL1O43396 289 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 STAMBPO95630 424 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 BAG2O95816 211 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 CYP2E1P05181 493 aaPredicted RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 CSE1LP55060 971 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 PTK2Q05397 1052 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 NSUN2Q08J23 767 aaKnown RBP eCLIP7.44□□□□□ -1.22
BDNF-217ENST00000533131 LRRC74AQ0VAA2 488 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 KRT72Q14CN4 511 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 MEA1Q16626 185 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 PROSER3Q2NL68 480 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 ZNF540Q8NDQ6 660 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 HSPH1Q92598 858 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 BICC1Q9H694 974 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 DBF4Q9UBU7 674 aaPredicted RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 CPSF3Q9UKF6 684 aaKnown RBP7.44□□□□□ -1.22
BDNF-217ENST00000533131 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 GIT1Q9Y2X7 761 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 ZNF711Q9Y462 761 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 METP08581 1390 aa7.44□□□□□ -1.22
BDNF-217ENST00000533131 ZFYVE9O95405 1425 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms