RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PCSK9Q8NBP7 692 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 SMG8Q8ND04 991 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 SCFD2Q8WU76 684 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CRELD1Q96HD1 420 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 DNAJC25Q9H1X3 360 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 ADAM7Q9H2U9 754 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 TUT1Q9H6E5 874 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 PADI3Q9ULW8 664 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 ZNF213O14771 459 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 GIPC1O14908 333 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CASC3O15234 703 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 ATMINO43313 823 aaPredicted RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 ASGR2P07307 311 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CNPP09543 421 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 GIMD1P0DJR0 217 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CIITAP33076 1130 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 USP14P54578 494 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 MAPK7Q13164 816 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 GSE1Q14687 1217 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 ARHGEF6Q15052 776 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 MFSD14CQ5VZR4 134 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 RNF43Q68DV7 783 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 KIAA1841Q6NSI8 718 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 EEPD1Q7L9B9 569 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 TAS1R3Q7RTX0 852 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 DZIP1Q86YF9 867 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 ADGRF4Q8IZF3 695 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CAGE1Q8TC20 777 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 HAS1Q92839 578 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CLUAP1Q96AJ1 413 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 LZTS1Q9Y250 596 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 NPHP1O15259 732 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 EIF3JO75822 258 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 SP9P0CG40 484 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 SMIM10L2AP0DMW4 78 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 SMIM10L2BP0DMW5 78 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 AARSP49588 968 aaKnown RBP eCLIP2.08□□□□□ -2.08
KNL1-211ENST00000533001 TFAP4Q01664 338 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CALD1Q05682 793 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 ESPL1Q14674 2120 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 ALKAL1Q6UXT8 129 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 DEFB128Q7Z7B8 93 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 TICAM2Q86XR7 235 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 SFTPA1Q8IWL2 248 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 C12orf76Q8N812 135 aaPredicted RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 C7orf31Q8N865 590 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CMASQ8NFW8 434 aaPredicted RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 ADAM32Q8TC27 787 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CLSTN3Q9BQT9 956 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CLIP2Q9UDT6 1046 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.08□□□□□ -2.085e-7■■■□□ 18.3
KNL1-211ENST00000533001 DNAJC13O75165 2243 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 PKHD1P08F94 4074 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CNTNAP5Q8WYK1 1306 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 RANBP6O60518 1105 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 TTLL1O95922 423 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 GNAI2P04899 355 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 ADRB2P07550 413 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 KIF22Q14807 665 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 MRPL10Q7Z7H8 261 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 SLF2Q8IX21 1173 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 POF1BQ8WVV4 589 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 BOLA2Q9H3K6 86 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 NSUN3Q9H649 340 aaKnown RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 NRDE2Q9H7Z3 1164 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 VAV3Q9UKW4 847 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 PATL2C9JE40 543 aaKnown RBP2.07□□□□□ -2.08
KNL1-211ENST00000533001 TADA3O75528 432 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 EOMESO95936 686 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 TGFB3P10600 412 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 PSEN2P49810 448 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 SLFN13Q68D06 897 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 ANO5Q75V66 913 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 GPR149Q86SP6 731 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 RTP3Q9BQQ7 232 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 SEMA4CQ9C0C4 833 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 UBA5Q9GZZ9 404 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 LY9Q9HBG7 655 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 PCDHA2Q9Y5H9 948 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 MED12Q93074 2177 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 A0A0U1RQF3 1178 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 DCDC2CA8MYV0 355 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 EFSO43281 561 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 CAND2O75155 1236 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 CYP3A4P08684 503 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 APOBRQ0VD83 1088 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 PTPN14Q15678 1187 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 ZBTB6Q15916 424 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 TSGA10IPQ3SY00 556 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 ANKRD54Q6NXT1 300 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 TTC6Q86TZ1 520 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 CMTR2Q8IYT2 770 aaKnown RBP2.07□□□□□ -2.08
KNL1-211ENST00000533001 TMEM199Q8N511 208 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 FBXW7Q969H0 707 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 SAMD11Q96NU1 681 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 TRERF1Q96PN7 1200 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 PLVAPQ9BX97 442 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 AS3MTQ9HBK9 375 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 PTPRHQ9HD43 1115 aa2.07□□□□□ -2.08
KNL1-211ENST00000533001 SETD4Q9NVD3 440 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms