RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 MUC6Q6W4X9 2439 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 MSH4O15457 936 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 FGFR4P22455 802 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 SP100P23497 879 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 SFNP31947 248 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 CIITAP33076 1130 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 HSPA4P34932 840 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 TECP42680 631 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 KRT17Q04695 432 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 DSC3Q14574 896 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 ZBTB33Q86T24 672 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 VN1R2Q8NFZ6 395 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 MRPS27Q92552 414 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 EDAQ92838 391 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 UNC45AQ9H3U1 944 aa17.84■□□□□ 0.45
CHMP4A-204ENST00000530996 CPLX1O14810 134 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 FSCN2O14926 492 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 ZNF862O60290 1169 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 REC8O95072 547 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 EIF4BP23588 611 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 NHLH1Q02575 133 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 MTERF2Q49AM1 385 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 KCNT2Q6UVM3 1135 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 MIER3Q7Z3K6 550 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 TMC7Q7Z402 723 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 ECHDC2Q86YB7 292 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 SUGP1Q8IWZ8 645 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 GJA10Q969M2 543 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 CASD1Q96PB1 797 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 RIT2Q99578 217 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 ADAMTS10Q9H324 1103 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 LZTS1Q9Y250 596 aa17.83■□□□□ 0.44
CHMP4A-204ENST00000530996 PLXNA4Q9HCM2 1894 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 C5orf42Q9H799 3197 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 TMEM221A6NGB7 291 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 LOC730098B7Z3J9 87 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 M0R296 226 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 DARSP14868 501 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 IFNAR1P17181 557 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 GPC3P51654 580 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 FAM189BP81408 668 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 HELQQ8TDG4 1101 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 TBCKQ8TEA7 893 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 KCNH6Q9H252 994 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 SPG21Q9NZD8 308 aa17.82■□□□□ 0.44
CHMP4A-204ENST00000530996 LOXHD1Q8IVV2 1947 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 MRE11P49959 708 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 PLCB3Q01970 1234 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 SSRP1Q08945 709 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 CBX2Q14781 532 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 CLLU1OSQ5K130 101 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 TRIM67Q6ZTA4 783 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 TMEM87AQ8NBN3 555 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 SLC5A5Q92911 643 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 KCNB2Q92953 911 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 PBXIP1Q96AQ6 731 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 MRPL9Q9BYD2 267 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 GCOM2Q9BZD3 368 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 C22orf23Q9BZE7 217 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 NGRNQ9NPE2 291 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 SH3GLB2Q9NR46 395 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 RNF19AQ9NV58 838 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 DACT1Q9NYF0 836 aa17.81■□□□□ 0.44
CHMP4A-204ENST00000530996 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 CSDE1O75534 798 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 TDP2O95551 362 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 ATF7P17544 494 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 PDIA3P30101 505 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 DNM2P50570 870 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 USP11P51784 963 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 ZXDAP98168 799 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 NTRK3Q16288 839 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 ANKRD54Q6NXT1 300 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 LRRC55Q6ZSA7 311 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 PCDHA4Q9UN74 947 aa17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-204ENST00000530996 TMEM150BA6NC51 233 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 ZC3H11AO75152 810 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 STK3Q13188 491 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 XKR3Q5GH77 459 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 CPLX2Q6PUV4 134 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 RDM1Q8NG50 284 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 SUSD6Q92537 303 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 CASP10Q92851 521 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 TMEM169Q96HH4 297 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 SH2D3AQ9BRG2 576 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 INPP5FQ9Y2H2 1132 aa17.79■□□□□ 0.44
CHMP4A-204ENST00000530996 FNDC1Q4ZHG4 1894 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-204ENST00000530996 A0A0U1RQF3 1178 aa17.78■□□□□ 0.44
CHMP4A-204ENST00000530996 DEXIO95424 95 aa17.78■□□□□ 0.44
CHMP4A-204ENST00000530996 ALDH7A1P49419 539 aaKnown RBP17.78■□□□□ 0.44
CHMP4A-204ENST00000530996 DRP2Q13474 957 aa17.78■□□□□ 0.44
CHMP4A-204ENST00000530996 LONRF3Q496Y0 759 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms