RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ZNF654Q8IZM8 581 aa20.25■□□□□ 0.83
LTBP3-211ENST00000528966 VPS52Q8N1B4 723 aa20.25■□□□□ 0.83
LTBP3-211ENST00000528966 RNF169Q8NCN4 708 aa20.25■□□□□ 0.83
LTBP3-211ENST00000528966 CTCFLQ8NI51 663 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-211ENST00000528966 ACSF2Q96CM8 615 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-211ENST00000528966 AGO4Q9HCK5 861 aaKnown RBP20.25■□□□□ 0.83
LTBP3-211ENST00000528966 IRAK3Q9Y616 596 aa20.25■□□□□ 0.83
LTBP3-211ENST00000528966 CHD8Q9HCK8 2581 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 hCG_1642624A0A1W2PR95 340 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 BACH1O14867 736 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 NARSO43776 548 aaKnown RBP20.24■□□□□ 0.83
LTBP3-211ENST00000528966 ATP4AP20648 1035 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 KIF5BP33176 963 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 BCAR1P56945 870 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 CCDC149Q6ZUS6 474 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 OTOP3Q7RTS5 596 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
LTBP3-211ENST00000528966 GPR149Q86SP6 731 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 HELQQ8TDG4 1101 aa20.24■□□□□ 0.83
LTBP3-211ENST00000528966 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-211ENST00000528966 CFAP47Q6ZTR5 3102 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 KRBA1A5PL33 1030 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 E7EWF7 191 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 DDAH1O94760 285 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 ALDH7A1P49419 539 aaKnown RBP20.23■□□□□ 0.83
LTBP3-211ENST00000528966 FAM160B1Q5W0V3 765 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
LTBP3-211ENST00000528966 CABP7Q86V35 215 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 NCOA7Q8NI08 942 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 RIN2Q8WYP3 895 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-211ENST00000528966 TMEM169Q96HH4 297 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 LY9Q9HBG7 655 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 CHD6Q8TD26 2715 aa20.23■□□□□ 0.83
LTBP3-211ENST00000528966 DOCK8Q8NF50 2099 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 DDX39AO00148 427 aaKnown RBP20.22■□□□□ 0.83
LTBP3-211ENST00000528966 CTSAP10619 480 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 ZSCAN20P17040 1043 aaPredicted RBP20.22■□□□□ 0.83
LTBP3-211ENST00000528966 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
LTBP3-211ENST00000528966 CEP55Q53EZ4 464 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 SMC5Q8IY18 1101 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 DCLK2Q8N568 766 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 METTL13Q8N6R0 699 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 ZNF302Q9NR11 478 aa20.22■□□□□ 0.83
LTBP3-211ENST00000528966 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 A0A0U1RQF3 1178 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 CFHP08603 1231 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 CLCN3P51790 818 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 PTH1RQ03431 593 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-211ENST00000528966 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 BCL7CQ8WUZ0 217 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-211ENST00000528966 PGBD1Q96JS3 809 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 HINFPQ9BQA5 517 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 ADAMTS10Q9H324 1103 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 WNT16Q9UBV4 365 aa20.21■□□□□ 0.83
LTBP3-211ENST00000528966 MEIS1O00470 390 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 STK25O00506 426 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
LTBP3-211ENST00000528966 RXRAP19793 462 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 GNAQP50148 359 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 POLGP54098 1239 aaPredicted RBP20.2■□□□□ 0.82
LTBP3-211ENST00000528966 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
LTBP3-211ENST00000528966 SWSAP1Q6NVH7 229 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 DDX53Q86TM3 631 aaKnown RBP20.2■□□□□ 0.82
LTBP3-211ENST00000528966 RSAD2Q8WXG1 361 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 RUBCNQ92622 972 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 MRPL9Q9BYD2 267 aaKnown RBP20.2■□□□□ 0.82
LTBP3-211ENST00000528966 IGSF9Q9P2J2 1179 aa20.2■□□□□ 0.82
LTBP3-211ENST00000528966 ZC3H11AO75152 810 aaKnown RBP eCLIP20.19■□□□□ 0.82
LTBP3-211ENST00000528966 EIF4BP23588 611 aaKnown RBP20.19■□□□□ 0.82
LTBP3-211ENST00000528966 GIT2Q14161 759 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 LETM2Q2VYF4 491 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
LTBP3-211ENST00000528966 LINC01465Q8N7H1 131 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 IGSF21Q96ID5 467 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 VN1R3Q9BXE9 311 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 TBC1D17Q9HA65 648 aa20.19■□□□□ 0.82
LTBP3-211ENST00000528966 DHX15O43143 795 aaKnown RBP20.18■□□□□ 0.82
LTBP3-211ENST00000528966 SP9P0CG40 484 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 BBXQ8WY36 941 aaPredicted RBP20.18■□□□□ 0.82
LTBP3-211ENST00000528966 ZNF668Q96K58 619 aaPredicted RBP20.18■□□□□ 0.82
LTBP3-211ENST00000528966 DLGAP2Q9P1A6 1054 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 CA14Q9ULX7 337 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 AKT3Q9Y243 479 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 MAFBQ9Y5Q3 323 aaPredicted RBP20.18■□□□□ 0.82
LTBP3-211ENST00000528966 USP24Q9UPU5 2620 aa20.18■□□□□ 0.82
LTBP3-211ENST00000528966 DCNP07585 359 aaKnown RBP20.17■□□□□ 0.82
LTBP3-211ENST00000528966 FGFR4P22455 802 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 CLCN4P51793 760 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 NUCB1Q02818 461 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 TBC1D8BQ0IIM8 1120 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 RSPO4Q2I0M5 234 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms