RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 GTF2H3Q13889 308 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 SLC9A5Q14940 896 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 ODF1Q14990 250 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CLUL1Q15846 466 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 MINDY4Q4G0A6 757 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 EFCAB2Q5VUJ9 269 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 BTBD8Q5XKL5 378 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 STEAP3Q658P3 488 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CPZQ66K79 652 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CYB5RLQ6IPT4 315 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PPP4R4Q6NUP7 873 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 SLC4A10Q6U841 1118 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 ETV3LQ6ZN32 361 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 TTLL7Q6ZT98 887 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 NOSTRINQ8IVI9 506 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 TPH2Q8IWU9 490 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 UHMK1Q8TAS1 419 aaKnown RBP4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CPA5Q8WXQ8 436 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 LOXL4Q96JB6 756 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 C11orf84Q9BUA3 381 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-203ENST00000528762 KCNH7Q9NS40 1196 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PALD1Q9ULE6 856 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA9Q9Y5G4 932 aaKnown RBP4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA8Q9Y5G5 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA7Q9Y5G6 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA6Q9Y5G7 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA3Q9Y5H0 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA2Q9Y5H1 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 B3GALT1Q9Y5Z6 326 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 TRIM75PA6NK02 468 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 DDX3XO00571 662 aaKnown RBP eCLIP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 XPOTO43592 962 aaKnown RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 LTFP02788 710 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 PF4V1P10720 104 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 PTX3P26022 381 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 THBS2P35442 1172 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 OS9Q13438 667 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 HDAC1Q13547 482 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 GALEQ14376 348 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 ACAP2Q15057 778 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 PDCD1Q15116 288 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 FIGNQ5HY92 759 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 FSTL4Q6MZW2 842 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 CYP4F22Q6NT55 531 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 KSR2Q6VAB6 950 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 KCTD1Q719H9 257 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 LIMS2Q7Z4I7 341 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 MILR1Q7Z6M3 343 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 DGKHQ86XP1 1220 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 NME9Q86XW9 330 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 DCP2Q8IU60 420 aaKnown RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 TRIM48Q8IWZ4 208 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 RBM12BQ8IXT5 1001 aaKnown RBP4.21□□□□□ -1.74
BRCA2-203ENST00000528762 PHOSPHO1Q8TCT1 267 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 HSPBAP1Q96EW2 488 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 C8orf49Q96NF6 230 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 CD244Q9BZW8 370 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 AP5M1Q9H0R1 490 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 RIC8BQ9NVN3 520 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 SMPD4Q9NXE4 827 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 OBP2AQ9NY56 170 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 ST6GALNAC2Q9UJ37 374 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 RCAN3Q9UKA8 241 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 INVSQ9Y283 1065 aa4.21□□□□□ -1.74
BRCA2-203ENST00000528762 FAM90A27PA6NNH2 459 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 KDM1AO60341 852 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ZRANB2O95218 330 aaKnown RBP eCLIP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ZBTB7AO95365 584 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 IL33O95760 270 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ITGB3P05106 788 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 LPOP22079 712 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 SDHAP31040 664 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 GJA4P35212 333 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 MAGEA10P43363 369 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 EPHA5P54756 1037 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ITGA1P56199 1179 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ADAM17P78536 824 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 TUSC3Q13454 348 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 SEC23AQ15436 765 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 TBC1D10BQ4KMP7 808 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 EMC4Q5J8M3 183 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 CMTR2Q8IYT2 770 aaKnown RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 SAMD3Q8N6K7 520 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 FBXO41Q8TF61 875 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 CLEC4DQ8WXI8 215 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 SEC14L1Q92503 715 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 RTF1Q92541 710 aaKnown RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 CLIP3Q96DZ5 547 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ZNF496Q96IT1 587 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 C16orf92Q96LL3 132 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ACAP3Q96P50 834 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 PDGFDQ9GZP0 370 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-203ENST00000528762 MS4A5Q9H3V2 200 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 ZMAT4Q9H898 229 aa4.2□□□□□ -1.74
BRCA2-203ENST00000528762 MSRAQ9UJ68 235 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms