RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 BARX2Q9UMQ3 279 aaPredicted RBP17.52■□□□□ 0.4
CLNS1A-210ENST00000528364 KCNJ14Q9UNX9 436 aa17.52■□□□□ 0.4
CLNS1A-210ENST00000528364 CPLX1O14810 134 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 DCXO43602 365 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 EIF4BP23588 611 aaKnown RBP17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 TMOD1P28289 359 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 GPC3P51654 580 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 JAK3P52333 1124 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 TARBP2Q15633 366 aaKnown RBP17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 THNSL1Q8IYQ7 743 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 CEP89Q96ST8 783 aa17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
CLNS1A-210ENST00000528364 CYP3A7-CYP3A51PA0A087WV96 503 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 DEXIO95424 95 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 DARSP14868 501 aaKnown RBP17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 ZSCAN20P17040 1043 aaPredicted RBP17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 CYP3A7P24462 503 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 SFNP31947 248 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 PBX3P40426 434 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 TBC1D8BQ0IIM8 1120 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 INF2Q27J81 1249 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 MTERF2Q49AM1 385 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 FAM43BQ6ZT52 329 aaPredicted RBP17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 ECHDC2Q86YB7 292 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 PPP2R3CQ969Q6 453 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 TMEM117Q9H0C3 514 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 AAASQ9NRG9 546 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 HCN4Q9Y3Q4 1203 aa17.5■□□□□ 0.39
CLNS1A-210ENST00000528364 MUC6Q6W4X9 2439 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 PRR33A8MZF0 331 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 EYA4O95677 639 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 CLLU1OSQ5K130 101 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 ETNPPLQ8TBG4 499 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 NLRP7Q8WX94 980 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 SCLT1Q96NL6 688 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 NIFKQ9BYG3 293 aaKnown RBP17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 TLR9Q9NR96 1032 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 MUTYHQ9UIF7 546 aa17.49■□□□□ 0.39
CLNS1A-210ENST00000528364 EML1O00423 815 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 FSCN2O14926 492 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 SLC37A4O43826 429 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 UBE3AQ05086 875 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 COASYQ13057 564 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 XKR3Q5GH77 459 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 DAGLBQ8NCG7 672 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 C22orf23Q9BZE7 217 aa17.48■□□□□ 0.39
CLNS1A-210ENST00000528364 A0A087WZ62 844 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 EPB41L2O43491 1005 aaKnown RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 ATF7P17544 494 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 LAG3P18627 525 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 SCRN1Q12765 414 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 NONOQ15233 471 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 DUSP6Q16828 381 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 LONRF3Q496Y0 759 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 KCNT2Q6UVM3 1135 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 KSR1Q8IVT5 923 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 SMRP1Q8NCR6 262 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 RDM1Q8NG50 284 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 OXER1Q8TDS5 423 aa17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 MRPS27Q92552 414 aaKnown RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 FDXACB1Q9BRP7 624 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 USP15Q9Y4E8 981 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-210ENST00000528364 C5orf42Q9H799 3197 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 IGKV6-21A0A0C4DH24 114 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 A0A0U1RQF3 1178 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 HIDE1A8MVS5 230 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 CSPP1Q1MSJ5 1256 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 PLA2G4FQ68DD2 849 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 ANO5Q75V66 913 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 TPCN1Q9ULQ1 816 aa17.46■□□□□ 0.39
CLNS1A-210ENST00000528364 TECTAO75443 2155 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 NT5C1B-RDH14C9J2C7 533 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 HOXA2O43364 376 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 NPEPPSP55786 919 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 PLCB3Q01970 1234 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 GALNT17Q6IS24 598 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 CPLX2Q6PUV4 134 aaKnown RBP17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 MOXD1Q6UVY6 613 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms