RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ANKRD54Q6NXT1 300 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 Q6ZUG5 572 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 ABI1Q8IZP0 508 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 LRRC43Q8N309 656 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 LINC01465Q8N7H1 131 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 RNF169Q8NCN4 708 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 BRF1Q92994 677 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 PHKBQ93100 1093 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 ZNF558Q96NG5 402 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 ZDBF2Q9HCK1 2354 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 ZNF862O60290 1169 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 OATP04181 439 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 GNA11P29992 359 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 CIITAP33076 1130 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 TMEM184AQ6ZMB5 413 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 ECHDC2Q86YB7 292 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 LENG9Q96B70 501 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 PHOX2BQ99453 314 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 S1PR5Q9H228 398 aa27.08■■□□□ 1.93
USP47-205ENST00000525257 KMT2EQ8IZD2 1858 aa27.07■■□□□ 1.92
USP47-205ENST00000525257 PRPF3O43395 683 aaKnown RBP27.07■■□□□ 1.92
USP47-205ENST00000525257 CDC45O75419 566 aa27.07■■□□□ 1.92
USP47-205ENST00000525257 EIF4BP23588 611 aaKnown RBP27.07■■□□□ 1.92
USP47-205ENST00000525257 PRKCEQ02156 737 aa27.07■■□□□ 1.92
USP47-205ENST00000525257 SCLT1Q96NL6 688 aa27.07■■□□□ 1.92
USP47-205ENST00000525257 NGRNQ9NPE2 291 aaKnown RBP27.07■■□□□ 1.92
USP47-205ENST00000525257 DISC1Q9NRI5 854 aa27.07■■□□□ 1.92
USP47-205ENST00000525257 CHMP2AO43633 222 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 FGFR4P22455 802 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 SP100P23497 879 aaPredicted RBP27.06■■□□□ 1.92
USP47-205ENST00000525257 PPM1AP35813 382 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 SIGLEC14Q08ET2 396 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 UGCGQ16739 394 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 CLLU1OSQ5K130 101 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 SYCE2Q6PIF2 218 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 TMC7Q7Z402 723 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 FBXL6Q8N531 539 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 JAKMIP1Q96N16 626 aaKnown RBP27.06■■□□□ 1.92
USP47-205ENST00000525257 NRBP2Q9NSY0 501 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 NID2Q14112 1375 aa27.06■■□□□ 1.92
USP47-205ENST00000525257 MSH4O15457 936 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 GPC3P51654 580 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 PTPN5P54829 565 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 AKAP17AQ02040 695 aaKnown RBP27.05■■□□□ 1.92
USP47-205ENST00000525257 KRT17Q04695 432 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 BICD2Q8TD16 824 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 SPG21Q9NZD8 308 aa27.05■■□□□ 1.92
USP47-205ENST00000525257 DARSP14868 501 aaKnown RBP27.04■■□□□ 1.92
USP47-205ENST00000525257 PTPN21Q16825 1174 aa27.04■■□□□ 1.92
USP47-205ENST00000525257 HELQQ8TDG4 1101 aa27.04■■□□□ 1.92
USP47-205ENST00000525257 CCDC136Q96JN2 1154 aa27.04■■□□□ 1.92
USP47-205ENST00000525257 CDH22Q9UJ99 828 aa27.04■■□□□ 1.92
USP47-205ENST00000525257 GAS7O60861 476 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 TBC1D8BQ0IIM8 1120 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 BLOC1S2Q6QNY1 142 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 ZNF710Q8N1W2 664 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 CCDC148Q8NFR7 591 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 NLRP7Q8WX94 980 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 GJA10Q969M2 543 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 ASIC4Q96FT7 647 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 SLC26A6Q9BXS9 759 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 UNC45AQ9H3U1 944 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 VPS54Q9P1Q0 977 aa27.03■■□□□ 1.92
USP47-205ENST00000525257 EDIL3O43854 480 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 CSDE1O75534 798 aaKnown RBP27.02■■□□□ 1.92
USP47-205ENST00000525257 HOXB8P17481 243 aaPredicted RBP27.02■■□□□ 1.92
USP47-205ENST00000525257 ZBTB33Q86T24 672 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 SLC39A11Q8N1S5 342 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 PRRX2Q99811 253 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 TSHZ2Q9NRE2 1034 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 SNX14Q9Y5W7 946 aa27.02■■□□□ 1.92
USP47-205ENST00000525257 A0A0U1RQF3 1178 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 CA8P35219 290 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 JAK3P52333 1124 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 VCPP55072 806 aaKnown RBP27.01■■□□□ 1.91
USP47-205ENST00000525257 TCF15Q12870 199 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 DRP2Q13474 957 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 SMC1AQ14683 1233 aaKnown RBP27.01■■□□□ 1.91
USP47-205ENST00000525257 NTRK3Q16288 839 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 LRCH2Q5VUJ6 765 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 ZNF598Q86UK7 904 aaKnown RBP27.01■■□□□ 1.91
USP47-205ENST00000525257 CASP10Q92851 521 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 SLC5A5Q92911 643 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 KCNB2Q92953 911 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 RIT2Q99578 217 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 TEKT3Q9BXF9 490 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 RNF26Q9BY78 433 aaPredicted RBP27.01■■□□□ 1.91
USP47-205ENST00000525257 HCFC2Q9Y5Z7 792 aa27.01■■□□□ 1.91
USP47-205ENST00000525257 USP34Q70CQ2 3546 aa27■■□□□ 1.91
USP47-205ENST00000525257 NT5C1B-RDH14C9J2C7 533 aa27■■□□□ 1.91
USP47-205ENST00000525257 SFNP31947 248 aa27■■□□□ 1.91
USP47-205ENST00000525257 CENPQQ7L2Z9 268 aaPredicted RBP27■■□□□ 1.91
USP47-205ENST00000525257 SEPT9Q9UHD8 586 aaPredicted RBP27■■□□□ 1.91
USP47-205ENST00000525257 C2orf71A6NGG8 1288 aa26.99■■□□□ 1.91
USP47-205ENST00000525257 EOMESO95936 686 aa26.99■■□□□ 1.91
USP47-205ENST00000525257 MTERF2Q49AM1 385 aa26.99■■□□□ 1.91
USP47-205ENST00000525257 TPRNQ4KMQ1 711 aa26.99■■□□□ 1.91
USP47-205ENST00000525257 MRPL43Q8N983 215 aaKnown RBP26.99■■□□□ 1.91
USP47-205ENST00000525257 MRPL9Q9BYD2 267 aaKnown RBP26.99■■□□□ 1.91
USP47-205ENST00000525257 NCOA5Q9HCD5 579 aaKnown RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms