RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 CSADQ9Y600 493 aa10.85□□□□□ -0.67
CTNND1-210ENST00000524630 ERVV-1B6SEH8 477 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 COPEO14579 308 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 DNAJC6O75061 913 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■■■■□ 20.8
CTNND1-210ENST00000524630 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CCDC92Q53HC0 331 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ENAHQ8N8S7 591 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 NUP85Q9BW27 656 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 VIPAS39Q9H9C1 493 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 SCHIP1Q9P0W5 487 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ZNF711Q9Y462 761 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ZBED1O96006 694 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CAV1Q03135 178 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 DDX47Q9H0S4 455 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PSD3Q9NYI0 1048 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CNOT8Q9UFF9 292 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ABCC3O15438 1527 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CHD1O14646 1710 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 MIF4GDA9UHW6 222 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 SUSD4Q5VX71 490 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 C4orf50Q6ZRC1 276 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 HNRNPH1P31943 449 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 HEXIM2Q96MH2 286 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CCT8L2Q96SF2 557 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 APOBEC2Q9Y235 224 aaKnown RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ANGPTL3Q9Y5C1 460 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 TCP11X1B4DZS4 312 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 ARL4CP56559 192 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PEX3P56589 373 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 OSTNP61366 133 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 CDO1Q16878 200 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PASD1Q8IV76 773 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PDIK1LQ8N165 341 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-210ENST00000524630 USP21Q9UK80 565 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
CTNND1-210ENST00000524630 PP2D1A8MPX8 630 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 KPNA2P52292 529 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 OCA2Q04671 838 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 DCAF15Q66K64 600 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 ERICH1Q86X53 443 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 FBXO2Q9UK22 296 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 E9PMD0 336 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 INO80B-WBP1J3KQ70 363 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 DIAPH2O60879 1101 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 HSPA4LO95757 839 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 HSPA9P38646 679 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TMEM154Q6P9G4 183 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 ZNF564Q8TBZ8 553 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 PRPF31Q8WWY3 499 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 SEC16BQ96JE7 1060 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TTC1Q99614 292 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 INO80BQ9C086 356 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 PSAPP07602 524 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 ATICP31939 592 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 CORO7P57737 925 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 IQCB1Q15051 598 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 E9PCH4 1651 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 A0A1W2PQC6 194 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 BRAFP15056 766 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 SPATA4Q8NEY3 305 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TTC25Q96NG3 672 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 NR1H3Q13133 447 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 PDXDC1Q6P996 788 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 FAM149B1Q96BN6 582 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 MSTO1Q9BUK6 570 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 IRX2Q9BZI1 471 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 BSDC1Q9NW68 430 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 TRPC5Q9UL62 973 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-210ENST00000524630 ARAP3Q8WWN8 1544 aa10.83□□□□□ -0.68
CTNND1-210ENST00000524630 FSCBQ5H9T9 825 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 SNF8Q96H20 258 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 GPR101Q96P66 508 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-210ENST00000524630 STRIP2Q9ULQ0 834 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 CHN1P15882 459 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 PCYT1AP49585 367 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 FMR1Q06787 632 aaKnown RBP eCLIP10.82□□□□□ -0.681e-6■■■■□ 23.3
CTNND1-210ENST00000524630 HLFQ16534 295 aa10.82□□□□□ -0.68
CTNND1-210ENST00000524630 RBM41Q96IZ5 413 aaKnown RBP10.82□□□□□ -0.68
CTNND1-210ENST00000524630 INTS2Q9H0H0 1204 aaKnown RBP10.82□□□□□ -0.68
CTNND1-210ENST00000524630 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms