RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	GNA14	O95837	355 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSPA8	P11142	646 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TCP1	P17987	556 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	CD9	P21926	228 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP3K10	Q02779	954 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	RIPPLY1	Q0D2K3	151 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	MTX1	Q13505	466 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TUBA3C	Q13748	450 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZYX	Q15942	572 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TAF12	Q16514	161 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	BRDT	Q58F21	947 aa	Predicted RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TTC23L	Q6PF05	361 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	MARK2	Q7KZI7	788 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	UBE2Q1	Q7Z7E8	422 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	SULF1	Q8IWU6	871 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	KIRREL3	Q8IZU9	778 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	SUPT20H	Q8NEM7	779 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.15	□□□□□ -1.75	2e-6	■■■□□ 15.6
FAM49B-225	ENST00000523288	PGM2	Q96G03	612 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	ANKRD36BP1	Q96IX9	119 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	ISCU	Q9H1K1	167 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	DCLRE1B	Q9H816	532 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	GINM1	Q9NU53	330 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	FANCL	Q9NW38	375 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	STOML1	Q9UBI4	398 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	GGA1	Q9UJY5	639 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	LUC7L2	Q9Y383	392 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	UMODL1	Q5DID0	1318 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	WDR19	Q8NEZ3	1342 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	NWD2	Q9ULI1	1742 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	DLEC1	Q9Y238	1755 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	KIF1A	Q12756	1690 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	SCN4A	P35499	1836 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	RGS13	O14921	159 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TBCA	O75347	108 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	BAIAP3	O94812	1187 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT6A	P02538	564 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT6B	P04259	564 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	LDHB	P07195	334 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	UBL4A	P11441	157 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	RFC5	P40937	340 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TXK	P42681	527 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	APLP1	P51693	650 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	ADAR	P55265	1226 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	POU5F1	Q01860	360 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	DCTN2	Q13561	401 aa	Known RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMEM266	Q2M3C6	531 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	KANK3	Q6NY19	840 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	B3GNT6	Q6ZMB0	384 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	DAAM2	Q86T65	1068 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	COL23A1	Q86Y22	540 aa	Predicted RBP	4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	C2CD5	Q86YS7	1000 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	CREG2	Q8IUH2	290 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	SEPT12	Q8IYM1	358 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	LINC00301	Q8NCQ3	95 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	MORC4	Q8TE76	937 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	PIGO	Q8TEQ8	1089 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TTC9	Q92623	222 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	RAB34	Q9BZG1	259 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	ANKRD2	Q9GZV1	360 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	VPS16	Q9H269	839 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	OCEL1	Q9H607	264 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	GTF3C4	Q9UKN8	822 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	PCDHA7	Q9UN72	937 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	B3GNT3	Q9Y2A9	372 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	LAMB4	A4D0S4	1761 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTNL10	A8MVZ5	291 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	KIF28P	B7ZC32	967 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CYP1A1	P04798	512 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NUDT17	P0C025	328 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ENPP1	P22413	925 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRAP1	Q12931	704 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP7D1	Q3KQU3	841 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ARL13B	Q3SXY8	428 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM91A1	Q658Y4	838 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTNL9	Q6UXG8	535 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PRR23C	Q6ZRP0	262 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MFSD6	Q6ZSS7	791 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CYP2U1	Q7Z449	544 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DNAJC10	Q8IXB1	793 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CSGALNACT2	Q8N6G5	542 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PTCD2	Q8WV60	388 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CASP10	Q92851	521 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DCPS	Q96C86	337 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM89A	Q96GI7	184 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PSD2	Q9BQI7	771 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	STMN4	Q9H169	189 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GBA3	Q9H227	469 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TPK1	Q9H3S4	243 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC38A10	Q9HBR0	1119 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SEL1L	Q9UBV2	794 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CNOT7	Q9UIV1	285 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMEM59L	Q9UK28	342 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SNX12	Q9UMY4	172 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GINS2	Q9Y248	185 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PCDHGB3	Q9Y5G1	929 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms