RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 NUP93Q8N1F7 819 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 ENGASEQ8NFI3 743 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 DPF2Q92785 391 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 EFHD2Q96C19 240 aaPredicted RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 RAB3IPQ96QF0 476 aaPredicted RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 MMS19Q96T76 1030 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 EPB41L1Q9H4G0 881 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 ECT2Q9H8V3 914 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 PPCSQ9HAB8 311 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 PCDH12Q9NPG4 1184 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 CCDC177Q9NQR7 707 aaPredicted RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 NKX1-2Q9UD57 310 aaPredicted RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 HERC5Q9UII4 1024 aaKnown RBP8.9□□□□□ -0.98
HMGB4-204ENST00000522796 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
HMGB4-204ENST00000522796 A0A087WWV3 80 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 TMEM114B3SHH9 223 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 LILRB3O75022 631 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 HMOX2P30519 316 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 UBA7P41226 1012 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 MTHFRP42898 656 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 KPNA1P52294 538 aaPredicted RBP8.9□□□□□ -0.99
HMGB4-204ENST00000522796 OCRLQ01968 901 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 EXOSC9Q06265 439 aaKnown RBP8.9□□□□□ -0.99
HMGB4-204ENST00000522796 PSMD6Q15008 389 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 CYTH1Q15438 398 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 INSCQ1MX18 579 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 TTC23LQ6PF05 361 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 C16orf54Q6UWD8 224 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 CEP68Q76N32 757 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 FERMT3Q86UX7 667 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 MREGQ8N565 214 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 LSMEM1Q8N8F7 131 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 DDHD1Q8NEL9 900 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 MDM1Q8TC05 714 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 TMC2Q8TDI7 906 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 RAPGEF5Q92565 580 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 OSBP2Q969R2 916 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 MXD3Q9BW11 206 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 HSD3B7Q9H2F3 369 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 C12orf10Q9HB07 376 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 POLD4Q9HCU8 107 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 CD93Q9NPY3 652 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 SH3GLB2Q9NR46 395 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 DDX56Q9NY93 547 aaKnown RBP8.9□□□□□ -0.99
HMGB4-204ENST00000522796 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.99
HMGB4-204ENST00000522796 NFE2L3Q9Y4A8 694 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 ABCC12Q96J65 1359 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 OVOS2A0A0G2JMS6 1433 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 OVOS2A0A0J9YW53 1432 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 OVOS2Q6IE36 1432 aa8.9□□□□□ -0.99
HMGB4-204ENST00000522796 KRBA1A5PL33 1030 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 NCK2O43639 380 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 IDH3BO43837 385 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 ADAM23O75077 832 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 ATP9AO75110 1047 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 PEX11AO75192 247 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 ATP1A3P13637 1013 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 KRT10P13645 584 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 BLVRAP53004 296 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 PLS1Q14651 629 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 GALNTL6Q49A17 601 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 FAM133BQ5BKY9 247 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 SPECC1LQ69YQ0 1117 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 MARK2Q7KZI7 788 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 ASRGL1Q7L266 308 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 CATSPER4Q7RTX7 472 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 PIGWQ7Z7B1 504 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 SPATA2LQ8IUW3 424 aaPredicted RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 CHMP6Q96FZ7 201 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 XPO6Q96QU8 1125 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 SERINC2Q96SA4 455 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 SMARCAD1Q9H4L7 1026 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 EHMT1Q9H9B1 1298 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 VTA1Q9NP79 307 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 CNGB3Q9NQW8 809 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 TRAV6A0A075B6T7 132 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 HIP1O00291 1037 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 RNF113AO15541 343 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 TSPAN9O75954 239 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 NCAM1P13591 858 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 LIFRP42702 1097 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 RXRGP48443 463 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 HSD17B4P51659 736 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 MARSP56192 900 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 CETN1Q12798 172 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 MMGT1Q8N4V1 131 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 OTUD7AQ8TE49 926 aaPredicted RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 BCL7CQ8WUZ0 217 aaPredicted RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 TSGA13Q96PP4 275 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 CRNKL1Q9BZJ0 848 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 MTRF1LQ9UGC7 380 aaKnown RBP8.89□□□□□ -0.99
HMGB4-204ENST00000522796 PRAG1Q86YV5 1406 aa8.89□□□□□ -0.99
HMGB4-204ENST00000522796 SYNJ2O15056 1496 aa8.88□□□□□ -0.99
HMGB4-204ENST00000522796 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
HMGB4-204ENST00000522796 ERVV-2B6SEH9 535 aa8.88□□□□□ -0.99
HMGB4-204ENST00000522796 LARGE1O95461 756 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms