RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 SPTLC1O15269 473 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ZSCAN20P17040 1043 aaPredicted RBP11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 GRM4Q14833 912 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ZNF528Q3MIS6 628 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ZFHX4Q86UP3 3567 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 DCLK2Q8N568 766 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 STAMQ92783 540 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 ZBTB10Q96DT7 871 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SH2D4A-202ENST00000518040 COL1A2P08123 1366 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 HBP1O60381 514 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 SRFP11831 508 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 ITGB5P18084 799 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 KLRC1P26715 233 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 DSC3Q14574 896 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 SEC23AQ15436 765 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 ELMSAN1Q6PJG2 1045 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 TMC5Q6UXY8 1006 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 CYP26C1Q6V0L0 522 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 TRAPPC12Q8WVT3 735 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 PCYT2Q99447 389 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 TBC1D17Q9HA65 648 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 UBIAD1Q9Y5Z9 338 aa11.25□□□□□ -0.61
SH2D4A-202ENST00000518040 KRBA1A5PL33 1030 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 MEIS2O14770 477 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 CYTH3O43739 400 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 CFHP08603 1231 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 CTSAP10619 480 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 EPCAMP16422 314 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 USP17L6PQ6QN14 398 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 FAM228AQ86W67 206 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 KIAA0319LQ8IZA0 1049 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 TMEM40Q8WWA1 233 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 SDF4Q9BRK5 362 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 RHOBTB2Q9BYZ6 727 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 JADE2Q9NQC1 790 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 DPP7Q9UHL4 492 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 CACNA1GO43497 2377 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 NFASCO94856 1347 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 ERICH2A1L162 156 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 ADRB1P08588 477 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 PBX3P40426 434 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 PDE1AP54750 535 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 DDX53Q86TM3 631 aaKnown RBP11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 SHDQ96IW2 340 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 EMILIN2Q9BXX0 1053 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 DLGAP2Q9P1A6 1054 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 FBXO4Q9UKT5 387 aa11.24□□□□□ -0.61
SH2D4A-202ENST00000518040 NARSO43776 548 aaKnown RBP11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 METAP2P50579 478 aaKnown RBP eCLIP11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 EMP3P54852 163 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 BCAR1P56945 870 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 ACTR2P61160 394 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 TRDNQ13061 729 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 SPECC1Q5M775 1068 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 FAM160B1Q5W0V3 765 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 ECHDC2Q86YB7 292 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 CMASQ8NFW8 434 aaPredicted RBP11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 RRP36Q96EU6 259 aaKnown RBP11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 PKD2L1Q9P0L9 805 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
SH2D4A-202ENST00000518040 FRYLO94915 3013 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 ATG7O95352 703 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 ARP10275 920 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 SMARCA1P28370 1054 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 SLC44A3Q8N4M1 653 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 OSMRQ99650 979 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
SH2D4A-202ENST00000518040 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
SH2D4A-202ENST00000518040 SDSP20132 328 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms