RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CYP2C19P33261 490 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 SOX9P48436 509 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 RRP1P56182 461 aaKnown RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 APOBRQ0VD83 1088 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 PWP1Q13610 501 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 CCINQ13939 588 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 UVSSAQ2YD98 709 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 STRIP1Q5VSL9 837 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 KIAA1211LQ6NV74 962 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 NCAPG2Q86XI2 1143 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 OR13H1Q8NG92 308 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 FBXO27Q8NI29 283 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 USP6NLQ92738 828 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 PMEPA1Q969W9 287 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 PRMT6Q96LA8 375 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 NSUN5Q96P11 429 aaKnown RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 OSMRQ99650 979 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 PPP4R2Q9NY27 417 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 FLRT1Q9NZU1 646 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 USP15Q9Y4E8 981 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 SUPT16HQ9Y5B9 1047 aaKnown RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 SMCHD1A6NHR9 2005 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 MED13LQ71F56 2210 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 OTOGQ6ZRI0 2925 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.73
CPNE3-204ENST00000517862 MAPK8IP3Q9UPT6 1336 aa4.21□□□□□ -1.73
CPNE3-204ENST00000517862 NIPBLQ6KC79 2804 aaeCLIP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 U2SURPO15042 1029 aaKnown RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 LRP3O75074 770 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 ACTN1P12814 892 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 TFE3P19532 575 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SP100P23497 879 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 HSD3B2P26439 372 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 NDUFV1P49821 464 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 LIMK1P53667 647 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CAMK2GQ13555 558 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 RAB33AQ14088 237 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CSRP2Q16527 193 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CFAP100Q494V2 611 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 AASDHQ4L235 1098 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SEZ6Q53EL9 994 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 FAM47AQ5JRC9 791 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SPECC1Q5M775 1068 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SLC10A5Q5PT55 438 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PCNX4Q63HM2 1172 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 HIST2H2BCQ6DN03 193 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 TTBK2Q6IQ55 1244 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 BNC2Q6ZN30 1099 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 NFXL1Q6ZNB6 911 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PPP1R42Q7Z4L9 355 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CCNJLQ8IV13 435 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CCAR1Q8IX12 1150 aaKnown RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 ARMC10Q8N2F6 343 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CELF2-AS1Q8N7Q2 184 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 FAM169BQ8N8A8 192 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SMRP1Q8NCR6 262 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 TDRD7Q8NHU6 1098 aaKnown RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 ASAP3Q8TDY4 903 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 NUP133Q8WUM0 1156 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PLD4Q96BZ4 506 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 MSLNLQ96KJ4 702 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 DEPDC7Q96QD5 511 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CRBNQ96SW2 442 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 NT5C1AQ9BXI3 368 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 SRRTQ9BXP5 876 aaKnown RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 CEP41Q9BYV8 373 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 GSX2Q9BZM3 304 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 HIPK3Q9H422 1215 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 LGR6Q9HBX8 967 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 ST7Q9NRC1 585 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 TERF2IPQ9NYB0 399 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 FAM53CQ9NYF3 392 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 GPN3Q9UHW5 284 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-204ENST00000517862 KLK13Q9UKR3 277 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 RAB23Q9ULC3 237 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PPM1HQ9ULR3 514 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PCDHB5Q9Y5E4 795 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PCDHGA2Q9Y5H1 932 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 ADGRG4Q8IZF6 3080 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PDZD2O15018 2839 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PTPRFP10586 1907 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 PTPRSQ13332 1948 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 UMODL1Q5DID0 1318 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 KIF16BQ96L93 1317 aa4.21□□□□□ -1.74
CPNE3-204ENST00000517862 HIVEP3Q5T1R4 2406 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 hCG_2014768A0A024R1R8 64 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 A0A0G2JLL6 359 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 LINC01553A4QN01 128 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 TCP10L2B9ZVM9 353 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 LINC01565O15544 149 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SEPT4O43236 478 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 FOXD2O60548 495 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 GREM1O60565 184 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 DEAF1O75398 565 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 F13A1P00488 732 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 CYBAP13498 195 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms