RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 KCNG1Q9UIX4 513 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EVPLQ92817 2033 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SIP14410 1827 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZMYM2Q9UBW7 1377 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ITIH6Q6UXX5 1313 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CCDC169A6NNP5 214 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ESPNB1AK53 854 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 H0YCG3 227 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SLC16A4O15374 487 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 AOC2O75106 756 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NR3C1P04150 777 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 MARK3P27448 753 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ABCD1P33897 745 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PBX1P40424 430 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NPTX2P47972 431 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 APLP1P51693 650 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NCKAP1LP55160 1127 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 FCGRTP55899 365 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 KCNA1Q09470 495 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ADAM9Q13443 819 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TARBP2Q15633 366 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NFIL3Q16649 462 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 MAN2A1Q16706 1144 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PTPN21Q16825 1174 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 DUSP28Q4G0W2 176 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GJC2Q5T442 439 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HAUS6Q7Z4H7 955 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 OR6J1Q8NGC5 347 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CACTINQ8WUQ7 758 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 AFG1LQ8WV93 481 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SPIRE2Q8WWL2 714 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HVCN1Q96D96 273 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ACCSQ96QU6 501 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NOC4LQ9BVI4 516 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 STRA6Q9BX79 667 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GBP3Q9H0R5 595 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 POLR3FQ9H1D9 316 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 DHX33Q9H6R0 707 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TMEM206Q9H813 350 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 KMT5AQ9NQR1 393 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ERAP1Q9NZ08 941 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GJD2Q9UKL4 321 aa8.4□□□□□ -1.06
SCARNA20.1-201ENST00000516009 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 A0A1W2PQC6 194 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TGFB1I1O43294 461 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 NRDCO43847 1150 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 HBP1O60381 514 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MAFO75444 373 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 LGALS2P05162 132 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TPM1P09493 284 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SMPD1P17405 629 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SCP2P22307 547 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SFPQP23246 707 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 YY1P25490 414 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PSMC4P43686 418 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MARSP56192 900 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SOX10P56693 466 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SNRPFP62306 86 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 GTF2BQ00403 316 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TNFAIP2Q03169 654 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TBX2Q13207 712 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PPP2R5AQ15172 486 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CCL14Q16627 93 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 VWA3BQ502W6 1294 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PRAMEF19Q5SWL8 479 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FKBP15Q5T1M5 1219 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PPFIBP1Q86W92 1011 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 KSR1Q8IVT5 923 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 LRRC8AQ8IWT6 810 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TCP11Q8WWU5 503 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 KCNF1Q9H3M0 494 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FLRT1Q9NZU1 646 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CGNQ9P2M7 1197 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 EXOC7Q9UPT5 735 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TRPC6Q9Y210 931 aa8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARNA20.1-201ENST00000516009 DENND3A2RUS2 1198 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CLIC2O15247 247 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SLC16A3O15427 465 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZNF865P0CJ78 1059 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CTGFP29279 349 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CYP2C19P33261 490 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms