RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 C2orf71A6NGG8 1288 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 ST18O60284 1047 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 GFRA3O60609 400 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 BRD1O95696 1058 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 WEE2P0C1S8 567 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 FGFR4P22455 802 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 UGCGQ16739 394 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 ODR4Q5SWX8 454 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF746Q6NUN9 644 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-212ENST00000513538 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 SYNE3Q6ZMZ3 975 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
TCOF1-212ENST00000513538 CKAP2LQ8IYA6 745 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 SLC39A11Q8N1S5 342 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 KREMEN2Q8NCW0 462 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF558Q96NG5 402 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 NGRNQ9NPE2 291 aaKnown RBP10.93□□□□□ -0.66
TCOF1-212ENST00000513538 HCFC2Q9Y5Z7 792 aa10.93□□□□□ -0.66
TCOF1-212ENST00000513538 KLF18A0A0U1RQI7 1052 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 ESYT2A0FGR8 921 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 NT5C1B-RDH14C9J2C7 533 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 H0Y858 1186 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 CLASP2O75122 1294 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 ASGR2P07307 311 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 PSAPP07602 524 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 CPA1P15085 419 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 HOXB8P17481 243 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 EIF4BP23588 611 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 ADD1P35611 737 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 GPC3P51654 580 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 DRP2Q13474 957 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 PFKFB3Q16875 520 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 TMC7Q7Z402 723 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 C12orf76Q8N812 135 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 TMEM105Q8N8V8 129 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 MRPL43Q8N983 215 aaKnown RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 HELQQ8TDG4 1101 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 BCL7CQ8WUZ0 217 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-212ENST00000513538 AUTS2Q8WXX7 1259 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 CASP10Q92851 521 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 ZMYND12Q9H0C1 365 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 ADAM7Q9H2U9 754 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 TBC1D22BQ9NU19 505 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 SPG21Q9NZD8 308 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 PCDHA10Q9Y5I2 948 aa10.92□□□□□ -0.66
TCOF1-212ENST00000513538 CFAP54Q96N23 3096 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 TMEM150BA6NC51 233 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 MAGEB2O15479 319 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 HOXA2O43364 376 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 B4GALT3O60512 393 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 OATP04181 439 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 DARSP14868 501 aaKnown RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 CIITAP33076 1130 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 PPM1AP35813 382 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 METAP2P50579 478 aaKnown RBP eCLIP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 PRKCEQ02156 737 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 SMC1AQ14683 1233 aaKnown RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 PRR16Q569H4 304 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 REXO1Q8N1G1 1221 aaKnown RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 GJA10Q969M2 543 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 MAP7D2Q96T17 732 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 GLT8D2Q9H1C3 349 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 CEP131Q9UPN4 1083 aa10.91□□□□□ -0.66
TCOF1-212ENST00000513538 ZFHX2Q9C0A1 2572 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-212ENST00000513538 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-212ENST00000513538 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 MSH4O15457 936 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-212ENST00000513538 STBD1O95210 358 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 EPCAMP16422 314 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 ZSCAN20P17040 1043 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-212ENST00000513538 RCAN1P53805 252 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 BCAR1P56945 870 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 TARBP2Q15633 366 aaKnown RBP10.9□□□□□ -0.66
TCOF1-212ENST00000513538 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 RARS2Q5T160 578 aaKnown RBP10.9□□□□□ -0.66
TCOF1-212ENST00000513538 ASCL5Q7RTU5 278 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 ZBTB33Q86T24 672 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 LPPQ93052 612 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 CEP89Q96ST8 783 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 VN1R3Q9BXE9 311 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 ZBP1Q9H171 429 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms