RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 hCG_1642624A0A1W2PR95 340 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 ENPP3O14638 875 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 DGKIO75912 1065 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 SMIM10L2AP0DMW4 78 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 SMIM10L2BP0DMW5 78 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 GHRP10912 638 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 TECP42680 631 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 GHRHRQ02643 423 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 AP3B2Q13367 1082 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 ST3GAL2Q16842 350 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 HSDL1Q3SXM5 330 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 RESP18Q5W5W9 173 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 CCDC73Q6ZRK6 1079 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 DCLK2Q8N568 766 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 SPATA33Q96N06 139 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 NAP1L4Q99733 375 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 AMNQ9BXJ7 453 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 COL20A1Q9P218 1284 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 FBXO2Q9UK22 296 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 R4GN57 208 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 MYO15AQ9UKN7 3530 aa11.78□□□□□ -0.52
PDLIM5-217ENST00000512274 TTC3P53804 2025 aa11.77□□□□□ -0.52
PDLIM5-217ENST00000512274 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 C2CD4DB7Z1M9 353 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 PIK3CDO00329 1044 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 PPFIA4O75335 1185 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 CAVIN2O95810 425 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 LIG1P18858 919 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 IBSPP21815 317 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 CLCN5P51795 746 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 ADCY7P51828 1080 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 RSPO4Q2I0M5 234 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 NAALADL2Q58DX5 795 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 EARS2Q5JPH6 523 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 L1TD1Q5T7N2 865 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 MOXD1Q6UVY6 613 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 ATP8B4Q8TF62 1192 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 CUL5Q93034 780 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 PYM1Q9BRP8 204 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 C16orf70Q9BSU1 422 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 FUCA2Q9BTY2 467 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 NUP62CLQ9H1M0 184 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 NR2E1Q9Y466 385 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
PDLIM5-217ENST00000512274 H3BRB1 525 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 CHRNA1P02708 482 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 GATMP50440 423 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 COL9A2Q14055 689 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 CWF19L1Q69YN2 538 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 SYCE2Q6PIF2 218 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 C4orf32Q8N8J7 132 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 CYP2W1Q8TAV3 490 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 TUT1Q9H6E5 874 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 DLL3Q9NYJ7 618 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 DOCK5Q9H7D0 1870 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 KAT6AQ92794 2004 aa11.76□□□□□ -0.53
PDLIM5-217ENST00000512274 GOLGA6L3A6NEY3 463 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 NR1I2O75469 434 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 GGPS1O95749 300 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 DUSP6Q16828 381 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 SPOUT1Q5T280 376 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 SHC4Q6S5L8 630 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 PIK3AP1Q6ZUJ8 805 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 CCDC105Q8IYK2 499 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 CRYGNQ8WXF5 182 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms