RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 N4BP2L1Q5TBK1 243 aaPredicted RBP10.51□□□□□ -0.73
NUP54-211ENST00000512151 TSSK4Q6SA08 328 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 FAM228AQ86W67 206 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 NETO1Q8TDF5 533 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 ATRIPQ8WXE1 791 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 PPP1R16BQ96T49 567 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 VN1R3Q9BXE9 311 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 EPS15L1Q9UBC2 864 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.5□□□□□ -0.73
NUP54-211ENST00000512151 SMIM35A0A1B0GVV1 85 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 LAMTOR5O43504 91 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 GDF9O60383 454 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 STAM2O75886 525 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 RPLP2P05387 115 aaKnown RBP10.5□□□□□ -0.73
NUP54-211ENST00000512151 PROS1P07225 676 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 GBP2P32456 591 aaPredicted RBP10.5□□□□□ -0.73
NUP54-211ENST00000512151 STARD6P59095 220 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 SHC2P98077 582 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 PTPN14Q15678 1187 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 LPAL2Q16609 132 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 MTHFD1LQ6UB35 978 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 KIAA0319LQ8IZA0 1049 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 ENAHQ8N8S7 591 aaPredicted RBP10.5□□□□□ -0.73
NUP54-211ENST00000512151 SECISBP2LQ93073 1101 aaKnown RBP10.5□□□□□ -0.73
NUP54-211ENST00000512151 KAT14Q9H8E8 782 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 PKD2L1Q9P0L9 805 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 IRAK3Q9Y616 596 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
NUP54-211ENST00000512151 CTSAP10619 480 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 BCAR1P56945 870 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 HOMER1Q86YM7 354 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 NME8Q8N427 588 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 PIGSQ96S52 555 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
NUP54-211ENST00000512151 SLC2A4RGQ9NR83 387 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 ZMIZ1Q9ULJ6 1067 aa10.49□□□□□ -0.73
NUP54-211ENST00000512151 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
NUP54-211ENST00000512151 EVPLQ92817 2033 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 SPEGQ15772 3267 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 A0A0D9SFI3 127 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 KLRF2D3W0D1 207 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 ANHXE9PGG2 379 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 TBC1D4O60343 1298 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 C1QTNF9P0C862 333 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 MYBP10242 640 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 ITGB5P18084 799 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 CLCN4P51793 760 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 HTR4Q13639 388 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 NONOQ15233 471 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUP54-211ENST00000512151 KIZQ2M2Z5 673 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 PCNX4Q63HM2 1172 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 ZNF589Q86UQ0 364 aaPredicted RBP10.48□□□□□ -0.73
NUP54-211ENST00000512151 ECHDC2Q86YB7 292 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 RNF169Q8NCN4 708 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 HELQQ8TDG4 1101 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 ESR2Q92731 530 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 KLHL5Q96PQ7 755 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 OSMRQ99650 979 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
NUP54-211ENST00000512151 WDR6Q9NNW5 1121 aaKnown RBP10.48□□□□□ -0.73
NUP54-211ENST00000512151 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 GMEB2Q9UKD1 530 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 CLUHO75153 1309 aa10.48□□□□□ -0.73
NUP54-211ENST00000512151 KANSL1LA0AUZ9 987 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 GPR182O15218 404 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 ZIC2O95409 532 aaPredicted RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 C7P10643 843 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 KLRC1P26715 233 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 GPC5P78333 572 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 C15orf39Q6ZRI6 1047 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 DDX53Q86TM3 631 aaKnown RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 NLRX1Q86UT6 975 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 TMEM87AQ8NBN3 555 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 GIMAP8Q8ND71 665 aaPredicted RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 TMEM169Q96HH4 297 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 ZSCAN10Q96SZ4 725 aaPredicted RBP10.47□□□□□ -0.73
NUP54-211ENST00000512151 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 PCDHB15Q9Y5E8 787 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 NUMBLQ9Y6R0 609 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 ZMYM6O95789 1325 aa10.47□□□□□ -0.73
NUP54-211ENST00000512151 DOCK6Q96HP0 2047 aa10.46□□□□□ -0.73
NUP54-211ENST00000512151 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 FAM170BA6NMN3 283 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 B4E1Z4 1266 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 HOXA2O43364 376 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms