RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 QARSP47897 775 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 NPEPPSP55786 919 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 PTPROQ16827 1216 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 CRIPAKQ8N1N5 446 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 ADAMTS19Q8TE59 1207 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 LXNQ9BS40 222 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 TBKBP1A7MCY6 615 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 TBX3O15119 743 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 GRM6O15303 877 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 FGFR1P11362 822 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 EIF4BP23588 611 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 CALCRLQ16602 461 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 FAM102BQ5T8I3 360 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 EP400NLQ6ZTU2 488 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 SLC24A5Q71RS6 500 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 RHPN2Q8IUC4 686 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 KSR1Q8IVT5 923 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 CMTR2Q8IYT2 770 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 NECAB3Q96P71 396 aaPredicted RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 CEP89Q96ST8 783 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 C11orf84Q9BUA3 381 aaPredicted RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 ALG13Q9NP73 1137 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 C1orf112Q9NSG2 853 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 HCSTQ9UBK5 93 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 RWDD3Q9Y3V2 267 aa16.6■□□□□ 0.25
UBE2D3-228ENST00000508974 A0A087WZ62 844 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 C9IYK1 514 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 NEMFO60524 1076 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 P4HBP07237 508 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 TXKP42681 527 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 DNM2P50570 870 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 SPIRE1Q08AE8 756 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 EPHA7Q15375 998 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 AAK1Q2M2I8 961 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 SPOUT1Q5T280 376 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 RNF169Q8NCN4 708 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 CLP1Q92989 425 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 NLRP4Q96MN2 994 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 FDXACB1Q9BRP7 624 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 SUCLA2Q9P2R7 463 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 COG5Q9UP83 839 aa16.59■□□□□ 0.25
UBE2D3-228ENST00000508974 IGKV6-21A0A0C4DH24 114 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 C5orf67F2Z3F1 127 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 ZBTB39O15060 712 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 ZSCAN20P17040 1043 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 MCM7P33993 719 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 DSC3Q14574 896 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 TIGD5Q53EQ6 642 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 TCEAL5Q5H9L2 206 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 FAM184AQ8NB25 1140 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 UHRF1Q96T88 793 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 GCOM2Q9BZD3 368 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 ATP6V0A4Q9HBG4 840 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 PCDHA12Q9UN75 941 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 BRWD1Q9NSI6 2320 aa16.58■□□□□ 0.24
UBE2D3-228ENST00000508974 MYO7AQ13402 2215 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 DKC1O60832 514 aaKnown RBP eCLIP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 RB1P06400 928 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 BMP1P13497 986 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 KCNA5P22460 613 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 YWHABP31946 246 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 SLC7A3Q8WY07 619 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 NSUN3Q9H649 340 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 UBE2ZQ9H832 354 aaPredicted RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
UBE2D3-228ENST00000508974 TTC28Q96AY4 2481 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 A0A087WWV3 80 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 POTEMA6NI47 508 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 ITGB1P05556 798 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 C4orf19Q8IY42 314 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 KLHL23Q8NBE8 558 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 ZSWIM4Q9H7M6 989 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 PLAGL2Q9UPG8 496 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 MUC3AQ02505 3323 aa16.56■□□□□ 0.24
UBE2D3-228ENST00000508974 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms