RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 EIF2AK2P19525 551 aaKnown RBP10□□□□□ -0.81
COL4A3BP-206ENST00000508809 SDSP20132 328 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 HOXC8P31273 242 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 SP2Q02086 613 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 HSDL1Q3SXM5 330 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 CELF3Q5SZQ8 465 aaKnown RBP10□□□□□ -0.81
COL4A3BP-206ENST00000508809 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10□□□□□ -0.814e-6■■■■□ 19.8
COL4A3BP-206ENST00000508809 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
COL4A3BP-206ENST00000508809 ENAHQ8N8S7 591 aaPredicted RBP10□□□□□ -0.81
COL4A3BP-206ENST00000508809 PDCD2LQ9BRP1 358 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 C16orf70Q9BSU1 422 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 ALG1Q9BT22 464 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 KAT14Q9H8E8 782 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 MRVI1Q9Y6F6 885 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 EMSYQ7Z589 1322 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 LAMA4Q16363 1823 aa10□□□□□ -0.81
COL4A3BP-206ENST00000508809 CFBP00751 764 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF286BP0CG31 522 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 SPEM2Q0P670 501 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 SFSWAPQ12872 951 aaKnown RBP9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 PLEKHG4Q58EX7 1191 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 GJD3Q8N144 294 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 DBF4BQ8NFT6 615 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 NEK9Q8TD19 979 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 TOP1MTQ969P6 601 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 MRPL38Q96DV4 380 aaKnown RBP9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 MYO19Q96H55 970 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 C17orf80Q9BSJ5 609 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 VAT1LQ9HCJ6 419 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
COL4A3BP-206ENST00000508809 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 B4E1Z4 1266 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 EPXP11678 715 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 PCBP4P57723 403 aaKnown RBP9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 KCNMA1Q12791 1236 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 PGM5Q15124 567 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 C11orf91Q3C1V1 193 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 KANK3Q6NY19 840 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 CLP1Q92989 425 aaKnown RBP9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 RILPL2Q969X0 211 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 SAMD11Q96NU1 681 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
COL4A3BP-206ENST00000508809 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 H3BNC9 293 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 H3BRB1 525 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 RBAK-RBAKDNI3L0D1 243 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZBTB5O15062 677 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 CAND2O75155 1236 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 GGPS1O95749 300 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 AMHP03971 560 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 KCNA5P22460 613 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 ALAS2P22557 587 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 THPOP40225 353 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 SEC23AQ15436 765 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 PTPROQ16827 1216 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 SYT9Q86SS6 491 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 MYOCDQ8IZQ8 938 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 ATP6V0A1Q93050 837 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 KRT23Q9C075 422 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 TUT1Q9H6E5 874 aaKnown RBP9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 PCDHA1Q9Y5I3 950 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 TTC3P53804 2025 aa9.97□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.81
COL4A3BP-206ENST00000508809 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 TREHO43280 583 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 SIN3BO75182 1162 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 ALADP13716 330 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 IL9P15248 144 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 ICAM3P32942 547 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 ADAM17P78536 824 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 OCLNQ16625 522 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 IMMTQ16891 758 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 SLC35G1Q2M3R5 365 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 IFIT1BQ5T764 474 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 IL31RAQ8NI17 732 aa9.96□□□□□ -0.82
COL4A3BP-206ENST00000508809 SEPT8Q92599 483 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms