RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX41-209ENST00000508279 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 LINC01465Q8N7H1 131 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 SLC7A3Q8WY07 619 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 TMEM143Q96AN5 459 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 NLRP4Q96MN2 994 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 PRDM6Q9NQX0 595 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 SUCLA2Q9P2R7 463 aaPredicted RBP10.5□□□□□ -0.73
DDX41-209ENST00000508279 FNDC1Q4ZHG4 1894 aaPredicted RBP10.5□□□□□ -0.73
DDX41-209ENST00000508279 A0A087WZ62 844 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 MAFO75444 373 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 SLITRK3O94933 977 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 STAG3L1P0CL83 205 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 ZSCAN20P17040 1043 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 EIF4BP23588 611 aaKnown RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 CTNNB1P35222 781 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 GATMP50440 423 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 ERVK-21P61565 698 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 SPOUT1Q5T280 376 aaKnown RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 NPAS4Q8IUM7 802 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 KSR1Q8IVT5 923 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 RNF169Q8NCN4 708 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 PIGOQ8TEQ8 1089 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 CEP89Q96ST8 783 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 JPH2Q9BR39 696 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 FDXACB1Q9BRP7 624 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 ADAMTS10Q9H324 1103 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.49□□□□□ -0.73
DDX41-209ENST00000508279 PCDHB7Q9Y5E2 793 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 ADGRA3Q8IWK6 1321 aa10.49□□□□□ -0.73
DDX41-209ENST00000508279 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 DARSP14868 501 aaKnown RBP10.48□□□□□ -0.73
DDX41-209ENST00000508279 SARSP49591 514 aaKnown RBP10.48□□□□□ -0.73
DDX41-209ENST00000508279 EMC2Q15006 297 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 EPC2Q52LR7 807 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 LARP1BQ659C4 914 aaKnown RBP10.48□□□□□ -0.73
DDX41-209ENST00000508279 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 TMEM192Q8IY95 271 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
DDX41-209ENST00000508279 MTRQ99707 1265 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 MTCH2Q9Y6C9 303 aa10.48□□□□□ -0.73
DDX41-209ENST00000508279 TCF20Q9UGU0 1960 aaKnown RBP10.47□□□□□ -0.73
DDX41-209ENST00000508279 IGKV6-21A0A0C4DH24 114 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 TBKBP1A7MCY6 615 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 LPXNO60711 386 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
DDX41-209ENST00000508279 MED24O75448 989 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 DGKIO75912 1065 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 U2AF2P26368 475 aaKnown RBP eCLIP10.47□□□□□ -0.732e-13■■□□□ 14.3
DDX41-209ENST00000508279 RFC5P40937 340 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 TRAPPC10P48553 1259 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 PTGDRQ13258 359 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 GPM6BQ13491 265 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 SLC24A5Q71RS6 500 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 CATSPER4Q7RTX7 472 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 EXOC8Q8IYI6 725 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 IL27Q8NEV9 243 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 ERMNQ8TAM6 284 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 NEK9Q8TD19 979 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 PSPC1Q8WXF1 523 aaKnown RBP10.47□□□□□ -0.73
DDX41-209ENST00000508279 RGS18Q9NS28 235 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 C1orf112Q9NSG2 853 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 COL4A3BPQ9Y5P4 624 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 TRANK1O15050 2925 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 REV3LO60673 3130 aa10.47□□□□□ -0.73
DDX41-209ENST00000508279 MYO7AQ13402 2215 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 VPS37CA5D8V6 355 aaPredicted RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 C9IYK1 514 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 FGFR1P11362 822 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 SFPQP23246 707 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDX41-209ENST00000508279 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 TOB1P50616 345 aaPredicted RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 CDC42EP1Q00587 391 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 LAMTOR4Q0VGL1 99 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 ORC2Q13416 577 aaPredicted RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 LONRF3Q496Y0 759 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 TWF2Q6IBS0 349 aaKnown RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 ZNF410Q86VK4 478 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 CATSPER3Q86XQ3 398 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 RNF149Q8NC42 400 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 TCP11Q8WWU5 503 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 PRPF31Q8WWY3 499 aaKnown RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 ZNF689Q96CS4 500 aaPredicted RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 SAMD11Q96NU1 681 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 HSD17B14Q9BPX1 270 aa10.46□□□□□ -0.73
DDX41-209ENST00000508279 INO80BQ9C086 356 aaPredicted RBP10.46□□□□□ -0.73
DDX41-209ENST00000508279 DHX33Q9H6R0 707 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms