RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	TRIP12	Q14669	1992 aa	Predicted RBP	6.56	□□□□□ -1.36
ATXN3-210	ENST00000507965	MYH7B	A7E2Y1	1941 aa		6.56	□□□□□ -1.36
ATXN3-210	ENST00000507965		A0A0C4DFX4	3053 aa		6.56	□□□□□ -1.36
ATXN3-210	ENST00000507965	NLRC5	Q86WI3	1866 aa		6.56	□□□□□ -1.36
ATXN3-210	ENST00000507965	MUC3A	Q02505	3323 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	CARNS1	A5YM72	827 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	TLR3	O15455	904 aa	Known RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	B4GALT4	O60513	344 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	PRMT3	O60678	531 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	PRNP	P04156	253 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	ZFY	P08048	801 aa	Predicted RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	MYOG	P15173	224 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	GNAT2	P19087	354 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	MCC	P23508	829 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SLC1A4	P43007	532 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	RABGGTB	P53611	331 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	CCL23	P55773	120 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	NFKBIB	Q15653	356 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	CCDC85B	Q15834	202 aa	Predicted RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	FSCN1	Q16658	493 aa	Known RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	VPS53	Q5VIR6	699 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	PSRC1	Q6PGN9	363 aa	Predicted RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SLC30A10	Q6XR72	485 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	CBLL1	Q75N03	491 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	NOL8	Q76FK4	1167 aa	Known RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	OTOP2	Q7RTS6	562 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	TMEM199	Q8N511	208 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	C12orf50	Q8NA57	414 aa	Predicted RBP	6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SLC43A3	Q8NBI5	491 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	VWCE	Q96DN2	955 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SCLY	Q96I15	445 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	GPATCH3	Q96I76	525 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	FSD1	Q9BTV5	496 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	KRTAP4-9	Q9BYQ8	210 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	NAPB	Q9H115	298 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	TRPV6	Q9H1D0	765 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	HIPK3	Q9H422	1215 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	DCTPP1	Q9H773	170 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SPC25	Q9HBM1	224 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	IL23A	Q9NPF7	189 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	IL17RB	Q9NRM6	502 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	CYP39A1	Q9NYL5	469 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	RAPGEFL1	Q9UHV5	662 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	SYNPO2	Q9UMS6	1093 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	STX8	Q9UNK0	236 aa		6.55	□□□□□ -1.36
ATXN3-210	ENST00000507965	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TTC41P	Q6P2S7	1318 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	SALL3	Q9BXA9	1300 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	MEGF11	A6BM72	1044 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TSPY2	A6NKD2	308 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	NFIB	O00712	420 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	JUNB	P17275	347 aa	Predicted RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	SLC16A2	P36021	539 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	NKX3-2	P78367	333 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	PDE4B	Q07343	736 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	ITGA7	Q13683	1181 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	SWI5	Q1ZZU3	235 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	CCDC96	Q2M329	555 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TTBK2	Q6IQ55	1244 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	B4GALNT3	Q6L9W6	998 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TAPT1	Q6NXT6	567 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	PAOX	Q6QHF9	649 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	NSMF	Q6X4W1	530 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	FAM160B2	Q86V87	743 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TET1	Q8NFU7	2136 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	STAG1	Q8WVM7	1258 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	HERVK_113	Q902F9	699 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	NOC4L	Q9BVI4	516 aa	Known RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	CHMP4B	Q9H444	224 aa	Known RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	ZNF287	Q9HBT7	754 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	TRMT13	Q9NUP7	481 aa	Known RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	KANSL3	Q9P2N6	904 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	CCPG1	Q9ULG6	757 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	NOVA2	Q9UNW9	492 aa	Known RBP	6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	MICAL3	Q7RTP6	2002 aa		6.54	□□□□□ -1.36
ATXN3-210	ENST00000507965	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	CHD7	Q9P2D1	2997 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	FAM95C	A0A1B0GW59	222 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	ASB14	A6NK59	587 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	TNFRSF10B	O14763	440 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	CYP26A1	O43174	497 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	DYNC1LI2	O43237	492 aa	Predicted RBP	6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	CYP2C9	P11712	490 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	MX1	P20591	662 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	ALDH5A1	P51649	535 aa	Predicted RBP	6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	C19orf57	Q0VDD7	668 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	RAB30	Q15771	203 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	TMEM164	Q5U3C3	297 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	NECAB3	Q96P71	396 aa	Predicted RBP	6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	MKNK1	Q9BUB5	465 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	NACAP1	Q9BZK3	213 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	AP5M1	Q9H0R1	490 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	RANBP17	Q9H2T7	1088 aa	Known RBP	6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	CYP4F12	Q9HCS2	524 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	THEG	Q9P2T0	379 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965	KIAA1671	Q9BY89	1806 aa		6.53	□□□□□ -1.36
ATXN3-210	ENST00000507965		A0A0D9SFI3	127 aa		6.52	□□□□□ -1.37
ATXN3-210	ENST00000507965	PTPDC1	A2A3K4	754 aa		6.52	□□□□□ -1.37
ATXN3-210	ENST00000507965	EPOP	A6NHQ4	379 aa		6.52	□□□□□ -1.37
ATXN3-210	ENST00000507965	RFXAP	O00287	272 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms