RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DNM1Q05193 864 aaKnown RBP20.24■□□□□ 0.83
NPHP4-210ENST00000506941 STK38Q15208 465 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 ZRSR1Q15695 479 aaKnown RBP20.24■□□□□ 0.83
NPHP4-210ENST00000506941 TMEM119Q4V9L6 283 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 SPECC1Q5M775 1068 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 RHPN2Q8IUC4 686 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 EXOC8Q8IYI6 725 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 LRRC15Q8TF66 581 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 PLIN2Q99541 437 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 MTIF3Q9H2K0 278 aaKnown RBP20.24■□□□□ 0.83
NPHP4-210ENST00000506941 BHMT2Q9H2M3 363 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 ATP6V0A4Q9HBG4 840 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 PADI3Q9ULW8 664 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 SLC4A7Q9Y6M7 1214 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 ABHD14A-ACY1A0A1B0GW23 586 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 ARHGEF35A5YM69 484 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 GAS2O43903 313 aaKnown RBP20.23■□□□□ 0.83
NPHP4-210ENST00000506941 YEATS4O95619 227 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 DEFB103AP81534 67 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 IKBKEQ14164 716 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
NPHP4-210ENST00000506941 APBB2Q92870 758 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 EPSTI1Q96J88 318 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 COL4A3BPQ9Y5P4 624 aa20.23■□□□□ 0.83
NPHP4-210ENST00000506941 NLRC5Q86WI3 1866 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 SPTLC2O15270 562 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 EYA4O95677 639 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 UBA7P41226 1012 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
NPHP4-210ENST00000506941 PAK2Q13177 524 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
NPHP4-210ENST00000506941 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
NPHP4-210ENST00000506941 TCP11Q8WWU5 503 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 NLRP7Q8WX94 980 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 PSPC1Q8WXF1 523 aaKnown RBP20.22■□□□□ 0.83
NPHP4-210ENST00000506941 LINC01599Q8WXQ3 324 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 TMX1Q9H3N1 280 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 ERVK-5Q9HDB9 667 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 GPRC5CQ9NQ84 441 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
NPHP4-210ENST00000506941 FNDC1Q4ZHG4 1894 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-210ENST00000506941 KIAA1671Q9BY89 1806 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 CDH23Q9H251 3354 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 A0A087WZ62 844 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 CSDE1O75534 798 aaKnown RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 RPS6KA5O75582 802 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 DARSP14868 501 aaKnown RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 ARL2P36404 184 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 LAMTOR4Q0VGL1 99 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 KARSQ15046 597 aaKnown RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 ATL3Q6DD88 541 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 TMCO2Q7Z6W1 182 aaPredicted RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 ASAP3Q8TDY4 903 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 SYMPKQ92797 1274 aaKnown RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 NLRP4Q96MN2 994 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 SCLT1Q96NL6 688 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 FDXACB1Q9BRP7 624 aaPredicted RBP20.21■□□□□ 0.83
NPHP4-210ENST00000506941 CCSER1Q9C0I3 900 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 NT5C3AQ9H0P0 336 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 IFT122Q9HBG6 1241 aa20.21■□□□□ 0.83
NPHP4-210ENST00000506941 COL4A6Q14031 1691 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 SLC26A4O43511 780 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 EFCAB14O75071 495 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 PPP6R2O75170 966 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
NPHP4-210ENST00000506941 CYP11B2P19099 503 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 FGFR4P22455 802 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 KCNJ6P48051 423 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 MAEAQ7L5Y9 396 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 ZNF410Q86VK4 478 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 CDK5RAP3Q96JB5 506 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 POLR3FQ9H1D9 316 aaPredicted RBP20.2■□□□□ 0.82
NPHP4-210ENST00000506941 ST3GAL5Q9UNP4 418 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 TRANK1O15050 2925 aa20.2■□□□□ 0.82
NPHP4-210ENST00000506941 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.19■□□□□ 0.82
NPHP4-210ENST00000506941 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.19■□□□□ 0.82
NPHP4-210ENST00000506941 MGEA5O60502 916 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 SRGAP2CP0DJJ0 459 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 PLCG1P19174 1290 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 GLRA2P23416 452 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 PBX2P40425 430 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
NPHP4-210ENST00000506941 CDC42EP1Q00587 391 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
NPHP4-210ENST00000506941 RTN4RL1Q86UN2 441 aaPredicted RBP20.19■□□□□ 0.82
NPHP4-210ENST00000506941 MCPH1Q8NEM0 835 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 CALML4Q96GE6 196 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 SLC9A7Q96T83 725 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 POLD4Q9HCU8 107 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms