RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ANKEF1Q9NU02 776 aa9.83□□□□□ -0.84
SCAMP1-202ENST00000506858 CCDC39Q9UFE4 941 aa9.83□□□□□ -0.84
SCAMP1-202ENST00000506858 ZMYND8Q9ULU4 1186 aaPredicted RBP9.83□□□□□ -0.84
SCAMP1-202ENST00000506858 GINS2Q9Y248 185 aa9.83□□□□□ -0.84
SCAMP1-202ENST00000506858 HPSEQ9Y251 543 aa9.83□□□□□ -0.84
SCAMP1-202ENST00000506858 MBLAC1A4D2B0 266 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TRIM43BA6NCK2 446 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 MYMKA6NI61 221 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 RRN3P2A6NIE6 340 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 DKC1O60832 514 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 MAFO75444 373 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 THPOP40225 353 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 POLGP54098 1239 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 CCL23P55773 120 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SNW1Q13573 536 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 EMC2Q15006 297 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 FAM102BQ5T8I3 360 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SERINC5Q86VE9 423 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SESTD1Q86VW0 696 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SYT2Q8N9I0 419 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TMEM87AQ8NBN3 555 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 BSNDQ8WZ55 320 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TRIM43Q96BQ3 446 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 DHX33Q9H6R0 707 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 PDLIM7Q9NR12 457 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TMEM39AQ9NV64 488 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 DBR1Q9UK59 544 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 RANBP2P49792 3224 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 PDE4DIPQ5VU43 2346 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 DCDC2CA8MYV0 355 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ZNF202O95125 648 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 CYP11B2P19099 503 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 MCM4P33991 863 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 EMP3P54852 163 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TRIM71Q2Q1W2 868 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 C1orf186Q6ZWK4 172 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ANKRD33Q7Z3H0 272 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 FMR1NBQ8N0W7 255 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 DAW1Q8N136 415 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 IQUBQ8NA54 791 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ENGASEQ8NFI3 743 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 GPT2Q8TD30 523 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 PRPF31Q8WWY3 499 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 LARP4BQ92615 738 aaKnown RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 HPS3Q969F9 1004 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SCLYQ96I15 445 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 KIFC3Q9BVG8 833 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 NT5C3AQ9H0P0 336 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 ZHX3Q9H4I2 956 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 SUCLA2Q9P2R7 463 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 AKT3Q9Y243 479 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 USP20Q9Y2K6 914 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 PCDHA2Q9Y5H9 948 aa9.82□□□□□ -0.84
SCAMP1-202ENST00000506858 LAMA2P24043 3122 aaKnown RBP9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 IGKV6-21A0A0C4DH24 114 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 FAM237AA0A1B0GTK4 181 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 HIP1RO75146 1068 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 CHRNA1P02708 482 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 SRGAP2CP0DJJ0 459 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 GNAT1P11488 350 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 FGFR4P22455 802 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 UBE2HP62256 183 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 PTPN11Q06124 597 aaPredicted RBP9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 CUL4BQ13620 913 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 SV2BQ7L1I2 683 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 RHPN2Q8IUC4 686 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 LINC01465Q8N7H1 131 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 SLC7A3Q8WY07 619 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 PAGE5Q96GU1 130 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 POLR3FQ9H1D9 316 aaPredicted RBP9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 ATP6V0A4Q9HBG4 840 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 DACT1Q9NYF0 836 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 COL1A2P08123 1366 aa9.81□□□□□ -0.84
SCAMP1-202ENST00000506858 ALPK3Q96L96 1907 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 MAGEB2O15479 319 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 EVI5O60447 810 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 KRT18P05783 430 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 CLTBP09497 229 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 SLFN14P0C7P3 912 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 CKBP12277 381 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 MUTP22033 750 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 GLRA2P23416 452 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 ARL2P36404 184 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 NLRP11P59045 1033 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 MAPK7Q13164 816 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 PTK7Q13308 1070 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 GIT2Q14161 759 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 CAMK4Q16566 473 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms