RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 C15orf39Q6ZRI6 1047 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 PPP1R16BQ96T49 567 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 IRAK3Q9Y616 596 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 CLUHO75153 1309 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 SPAG17Q6Q759 2223 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 ASH1LQ9NR48 2969 aaKnown RBP14.42□□□□□ -0.1
LSM6-204ENST00000504181 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 C1QTNF9BB2RNN3 333 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 GPR182O15218 404 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 ATP9AO75110 1047 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 FGAP02671 866 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 C1QTNF9P0C862 333 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 CTSAP10619 480 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 BCAR1P56945 870 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 UBXN2BQ14CS0 331 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 ALX1Q15699 326 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 ODR4Q5SWX8 454 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 TMEM173Q86WV6 379 aaPredicted RBP14.42□□□□□ -0.1
LSM6-204ENST00000504181 DGKHQ86XP1 1220 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 STAG2Q8N3U4 1231 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 NME8Q8N427 588 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 RNF169Q8NCN4 708 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
LSM6-204ENST00000504181 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 SHDQ96IW2 340 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 EPS15L1Q9UBC2 864 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 RAB23Q9ULC3 237 aa14.42□□□□□ -0.1
LSM6-204ENST00000504181 MTF2Q9Y483 593 aaPredicted RBP14.42□□□□□ -0.1
LSM6-204ENST00000504181 NEDD4P46934 1319 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 KANSL1LA0AUZ9 987 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 ZBTB5O15062 677 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 KCNA2P16389 499 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 ALDH7A1P49419 539 aaKnown RBP14.41□□□□□ -0.1
LSM6-204ENST00000504181 CLCN4P51793 760 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 SNW1Q13573 536 aaKnown RBP14.41□□□□□ -0.1
LSM6-204ENST00000504181 GIT2Q14161 759 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 WTAPQ15007 396 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 CLLU1OSQ5K130 101 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 POTEHQ6S545 545 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 PRR23CQ6ZRP0 262 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 FAM228AQ86W67 206 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 TBC1D10CQ8IV04 446 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 HELQQ8TDG4 1101 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 STAMQ92783 540 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 NELL1Q92832 810 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 PCYT2Q99447 389 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 SLC2A4RGQ9NR83 387 aa14.41□□□□□ -0.1
LSM6-204ENST00000504181 PDCD11Q14690 1871 aaKnown RBP14.4□□□□□ -0.1
LSM6-204ENST00000504181 ZIC2O95409 532 aaPredicted RBP14.4□□□□□ -0.1
LSM6-204ENST00000504181 KLRC2P26717 231 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 DSC3Q14574 896 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 UNQ6494/PRO21346Q6UXR6 183 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 NLRX1Q86UT6 975 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
LSM6-204ENST00000504181 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
LSM6-204ENST00000504181 WDR6Q9NNW5 1121 aaKnown RBP14.4□□□□□ -0.1
LSM6-204ENST00000504181 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 LAMA1P25391 3075 aa14.4□□□□□ -0.1
LSM6-204ENST00000504181 ADAMTS20P59510 1910 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 CCDC195A0A1B0GUA6 201 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 ZC3H11AO75152 810 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSM6-204ENST00000504181 MYBP10242 640 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 POLGP54098 1239 aaPredicted RBP14.39□□□□□ -0.11
LSM6-204ENST00000504181 HTR4Q13639 388 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 PCNX4Q63HM2 1172 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 IL31Q6EBC2 164 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 FAM43BQ6ZT52 329 aaPredicted RBP14.39□□□□□ -0.11
LSM6-204ENST00000504181 BCL7CQ8WUZ0 217 aaPredicted RBP14.39□□□□□ -0.11
LSM6-204ENST00000504181 ESR2Q92731 530 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 MTMR8Q96EF0 704 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 OSMRQ99650 979 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 NUMBLQ9Y6R0 609 aa14.39□□□□□ -0.11
LSM6-204ENST00000504181 DMXL2Q8TDJ6 3036 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 LRP3O75074 770 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 SSBP05455 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
LSM6-204ENST00000504181 CD72P21854 359 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 GPC5P78333 572 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 MLF2Q15773 248 aaPredicted RBP14.38□□□□□ -0.11
LSM6-204ENST00000504181 KIZQ2M2Z5 673 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 PRR23BQ6ZRT6 265 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
LSM6-204ENST00000504181 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
LSM6-204ENST00000504181 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 ECHDC2Q86YB7 292 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 KLHL5Q96PQ7 755 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
LSM6-204ENST00000504181 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 LHX6Q9UPM6 363 aa14.38□□□□□ -0.11
LSM6-204ENST00000504181 TDRD15B5MCY1 1934 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms