RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 GPC3P51654 580 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 NFX1Q12986 1120 aaKnown RBP17.58■□□□□ 0.4
DDR1-248ENST00000503180 DRP2Q13474 957 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 PKP1Q13835 747 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
DDR1-248ENST00000503180 HYIQ5T013 277 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 PADI6Q6TGC4 694 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
DDR1-248ENST00000503180 ZNF410Q86VK4 478 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 KRI1Q8N9T8 703 aaKnown RBP17.58■□□□□ 0.4
DDR1-248ENST00000503180 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 OSMRQ99650 979 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 MMTAG2Q9BU76 263 aaKnown RBP17.58■□□□□ 0.4
DDR1-248ENST00000503180 BHMT2Q9H2M3 363 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.4
DDR1-248ENST00000503180 SPTLC2O15270 562 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 YEATS4O95619 227 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 EYA4O95677 639 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 SRGAP2CP0DJJ0 459 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 TXLNAP40222 546 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 WDR5P61964 334 aaKnown RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 LAMTOR4Q0VGL1 99 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 TFDP1Q14186 410 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 ECM1Q16610 540 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 LINC00301Q8NCQ3 95 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 CSRNP2Q9H175 543 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 AGO3Q9H9G7 860 aaKnown RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 BMP2KQ9NSY1 1161 aaPredicted RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 CCDC39Q9UFE4 941 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 FBXO2Q9UK22 296 aaPredicted RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 ST3GAL5Q9UNP4 418 aa17.57■□□□□ 0.4
DDR1-248ENST00000503180 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
DDR1-248ENST00000503180 A0A087WZ62 844 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 E9PMD0 336 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 PPP6R2O75170 966 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 DARSP14868 501 aaKnown RBP17.56■□□□□ 0.4
DDR1-248ENST00000503180 CYP11B2P19099 503 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 NUCB2P80303 420 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 GPR153Q6NV75 609 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 NLRP4Q96MN2 994 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
DDR1-248ENST00000503180 CCSER1Q9C0I3 900 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 MSRAQ9UJ68 235 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 TET1Q8NFU7 2136 aa17.56■□□□□ 0.4
DDR1-248ENST00000503180 ENPP3O14638 875 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 ZSCAN20P17040 1043 aaPredicted RBP17.55■□□□□ 0.4
DDR1-248ENST00000503180 POU5F1BQ06416 359 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 RAB30Q15771 203 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 TCTN1Q2MV58 587 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 FAM102BQ5T8I3 360 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 KSR1Q8IVT5 923 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 KCNG4Q8TDN1 519 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 ZNF668Q96K58 619 aaPredicted RBP17.55■□□□□ 0.4
DDR1-248ENST00000503180 PLIN2Q99541 437 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
DDR1-248ENST00000503180 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 DENND3A2RUS2 1198 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 SFPQP23246 707 aaKnown RBP eCLIP17.54■□□□□ 0.4
DDR1-248ENST00000503180 ARL2P36404 184 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 PHKA2P46019 1235 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 FXR1P51114 621 aaKnown RBP eCLIP17.54■□□□□ 0.4
DDR1-248ENST00000503180 DNM1Q05193 864 aaKnown RBP17.54■□□□□ 0.4
DDR1-248ENST00000503180 GRIN1Q05586 938 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
DDR1-248ENST00000503180 GRB10Q13322 594 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 MAEAQ7L5Y9 396 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 MYOCDQ8IZQ8 938 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 RNF149Q8NC42 400 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 KIFAP3Q92845 792 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 PNMA5Q96PV4 448 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
DDR1-248ENST00000503180 GRXCR1A8MXD5 290 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 CUTAO60888 179 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDR1-248ENST00000503180 KRT85P78386 507 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 PCBP1Q15365 356 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDR1-248ENST00000503180 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDR1-248ENST00000503180 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
DDR1-248ENST00000503180 TOP1MTQ969P6 601 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 EPSTI1Q96J88 318 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
DDR1-248ENST00000503180 POLR3FQ9H1D9 316 aaPredicted RBP17.53■□□□□ 0.4
DDR1-248ENST00000503180 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
DDR1-248ENST00000503180 CHST12Q9NRB3 414 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms