RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 AMHP03971 560 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 CEBPZQ03701 1054 aaKnown RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 POU5F1BQ06416 359 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 RAB30Q15771 203 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 CABP7Q86V35 215 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 PRPF31Q8WWY3 499 aaKnown RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 TMEM143Q96AN5 459 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 CALML4Q96GE6 196 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 ERVK-5Q9HDB9 667 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 NOC2LQ9Y3T9 749 aaKnown RBP13.63□□□□□ -0.23
YIPF3-209ENST00000500090 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
YIPF3-209ENST00000500090 A0A087WWV3 80 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 ENPP3O14638 875 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 USO1O60763 962 aaKnown RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 PPP6R2O75170 966 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 YEATS4O95619 227 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 EYA4O95677 639 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 CYP11B2P19099 503 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 ARL2P36404 184 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 LAMTOR4Q0VGL1 99 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 PKP1Q13835 747 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 TFDP1Q14186 410 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 STK38Q15208 465 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 FAM109BQ6ICB4 259 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 HERC6Q8IVU3 1022 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 LINC00301Q8NCQ3 95 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 PPP1R16BQ96T49 567 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 BHMT2Q9H2M3 363 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-209ENST00000500090 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
YIPF3-209ENST00000500090 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 TMEM265A0A087WTH1 108 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 A0A087WZ62 844 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 SPTLC2O15270 562 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 TXLNAP40222 546 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 PCBP1Q15365 356 aaKnown RBP eCLIP13.61□□□□□ -0.23
YIPF3-209ENST00000500090 ZRSR1Q15695 479 aaKnown RBP13.61□□□□□ -0.23
YIPF3-209ENST00000500090 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 FDXACB1Q9BRP7 624 aaPredicted RBP13.61□□□□□ -0.23
YIPF3-209ENST00000500090 PBX4Q9BYU1 374 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 CSRNP2Q9H175 543 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 TFIP11Q9UBB9 837 aaKnown RBP13.61□□□□□ -0.23
YIPF3-209ENST00000500090 SIP14410 1827 aa13.61□□□□□ -0.23
YIPF3-209ENST00000500090 ARID2Q68CP9 1835 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 GRXCR1A8MXD5 290 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 GJB5O95377 273 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 SRGAP2CP0DJJ0 459 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 DNAJB2P25686 324 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 PHKA2P46019 1235 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 NUCB2P80303 420 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 DEFB103AP81534 67 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 GRIN1Q05586 938 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 GRB10Q13322 594 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 KSR1Q8IVT5 923 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 KIFAP3Q92845 792 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 RAD9AQ99638 391 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 TIPINQ9BVW5 301 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 CHST12Q9NRB3 414 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 C1orf112Q9NSG2 853 aa13.6□□□□□ -0.23
YIPF3-209ENST00000500090 BMP2KQ9NSY1 1161 aaPredicted RBP13.6□□□□□ -0.23
YIPF3-209ENST00000500090 KCND2Q9NZV8 630 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms