RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 POTEMA6NI47 508 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 RBAK-RBAKDNI3L0D1 243 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 RFXAPO00287 272 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 LYPLA2O95372 231 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 POU3F3P20264 500 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 SFPQP23246 707 aaKnown RBP eCLIP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 TECP42680 631 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 BTG3Q14201 252 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 RTN4RL1Q86UN2 441 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 MICALL1Q8N3F8 863 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 PSPC1Q8WXF1 523 aaKnown RBP19.7■□□□□ 0.74
HDAC4-211ENST00000494800 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 ANKEF1Q9NU02 776 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 COL4A6Q14031 1691 aa19.7■□□□□ 0.74
HDAC4-211ENST00000494800 LAD1O00515 517 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 DGKIO75912 1065 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 IBSPP21815 317 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-211ENST00000494800 GRB10Q13322 594 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 DRP2Q13474 957 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 RILPL1Q5EBL4 403 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 HAUS3Q68CZ6 603 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC4-211ENST00000494800 ZNF668Q96K58 619 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-211ENST00000494800 NLRP4Q96MN2 994 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 MTRQ99707 1265 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 C17orf80Q9BSJ5 609 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 DHX33Q9H6R0 707 aaKnown RBP19.69■□□□□ 0.74
HDAC4-211ENST00000494800 TUFT1Q9NNX1 390 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 LMCD1Q9NZU5 365 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 STK24Q9Y6E0 443 aa19.69■□□□□ 0.74
HDAC4-211ENST00000494800 WDR81Q562E7 1941 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 EPOPA6NHQ4 379 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 XRCC6P12956 609 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC4-211ENST00000494800 EMC2Q15006 297 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 CCDC85BQ15834 202 aaPredicted RBP19.68■□□□□ 0.74
HDAC4-211ENST00000494800 EPC2Q52LR7 807 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
HDAC4-211ENST00000494800 TMEM192Q8IY95 271 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 CMTR2Q8IYT2 770 aaKnown RBP19.68■□□□□ 0.74
HDAC4-211ENST00000494800 GDPD5Q8WTR4 605 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 DACT1Q9NYF0 836 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 COL4A3BPQ9Y5P4 624 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 MTCH2Q9Y6C9 303 aa19.68■□□□□ 0.74
HDAC4-211ENST00000494800 A0A087WZ62 844 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 ASAP2O43150 1006 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 MGEA5O60502 916 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 DGAT1O75907 488 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 PTPROQ16827 1216 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 SPRED2Q7Z698 418 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 ZNF689Q96CS4 500 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-211ENST00000494800 FDXACB1Q9BRP7 624 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-211ENST00000494800 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-211ENST00000494800 ELAC1Q9H777 363 aaKnown RBP19.67■□□□□ 0.74
HDAC4-211ENST00000494800 ATP6V0A4Q9HBG4 840 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 CHST12Q9NRB3 414 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 TMEM161AQ9NX61 479 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 EVPLQ92817 2033 aa19.67■□□□□ 0.74
HDAC4-211ENST00000494800 C9IYK1 514 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 HOXA2O43364 376 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 RB1P06400 928 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 PDCP20941 246 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 CTNNB1P35222 781 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 PTGDRQ13258 359 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 MXD4Q14582 209 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 NBR1Q14596 966 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 CRIPAKQ8N1N5 446 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 ZNF579Q8NAF0 562 aaKnown RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 PRPF31Q8WWY3 499 aaKnown RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 TMEM143Q96AN5 459 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 NACC1Q96RE7 527 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 C11orf84Q9BUA3 381 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 RC3H2Q9HBD1 1191 aaKnown RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 BMP2KQ9NSY1 1161 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-211ENST00000494800 LRWD1Q9UFC0 647 aa19.66■□□□□ 0.74
HDAC4-211ENST00000494800 ZBTB39O15060 712 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 SRGAP2CP0DJJ0 459 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 MUTP22033 750 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 RPA1P27694 616 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 TOB1P50616 345 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-211ENST00000494800 CUL4AQ13619 759 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 TFDP1Q14186 410 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 PDIA5Q14554 519 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 DSC3Q14574 896 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 SKIV2LQ15477 1246 aaKnown RBP19.65■□□□□ 0.74
HDAC4-211ENST00000494800 CATSPER4Q7RTX7 472 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 CATSPER3Q86XQ3 398 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 PIGOQ8TEQ8 1089 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 CLP1Q92989 425 aaKnown RBP19.65■□□□□ 0.74
HDAC4-211ENST00000494800 CHD7Q9P2D1 2997 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 PCDHB6Q9Y5E3 794 aa19.65■□□□□ 0.74
HDAC4-211ENST00000494800 H3BNC9 293 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 LPXNO60711 386 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 SKIP12755 728 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 BMPR1AP36894 532 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 PRPHP41219 470 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 PHKA2P46019 1235 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 RARRES1P49788 294 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 FAM189BP81408 668 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms