RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 ADD1P35611 737 aaKnown RBP15.52■□□□□ 0.08
SAMM50-204ENST00000493161 PFKFB3Q16875 520 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-204ENST00000493161 FAM43BQ6ZT52 329 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-204ENST00000493161 DHX32Q7L7V1 743 aaKnown RBP15.52■□□□□ 0.08
SAMM50-204ENST00000493161 ZBTB33Q86T24 672 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 LRRC43Q8N309 656 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 KREMEN2Q8NCW0 462 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 RIPOR3Q96MK2 946 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 NGRNQ9NPE2 291 aaKnown RBP15.52■□□□□ 0.08
SAMM50-204ENST00000493161 TBC1D22BQ9NU19 505 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 SPG21Q9NZD8 308 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 PCDHA10Q9Y5I2 948 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 HCFC2Q9Y5Z7 792 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 EDIL3O43854 480 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 GFRA3O60609 400 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
SAMM50-204ENST00000493161 BRD1O95696 1058 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 PSAPP07602 524 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 CPA1P15085 419 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
SAMM50-204ENST00000493161 KRT17Q04695 432 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 UGCGQ16739 394 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 PRR16Q569H4 304 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 SLC39A11Q8N1S5 342 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 C12orf76Q8N812 135 aaPredicted RBP15.51■□□□□ 0.07
SAMM50-204ENST00000493161 MRPL43Q8N983 215 aaKnown RBP15.51■□□□□ 0.07
SAMM50-204ENST00000493161 HELQQ8TDG4 1101 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 ATOH1Q92858 354 aaPredicted RBP15.51■□□□□ 0.07
SAMM50-204ENST00000493161 LENG9Q96B70 501 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 SNX27Q96L92 541 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 GLT8D2Q9H1C3 349 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 CFAP54Q96N23 3096 aa15.51■□□□□ 0.07
SAMM50-204ENST00000493161 MAGEB2O15479 319 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 HOXA2O43364 376 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 ZSCAN20P17040 1043 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 HOXB8P17481 243 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 PPM1AP35813 382 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 GPC3P51654 580 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 DRP2Q13474 957 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 ZNF598Q86UK7 904 aaKnown RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 TMEM173Q86WV6 379 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 SMAP1Q8IYB5 467 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 ABI1Q8IZP0 508 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 AUTS2Q8WXX7 1259 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 CASP10Q92851 521 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 GJA10Q969M2 543 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 ZMYND12Q9H0C1 365 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 ADAM7Q9H2U9 754 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-204ENST00000493161 SAMM50Q9Y512 469 aa15.5■□□□□ 0.07
SAMM50-204ENST00000493161 PLXNA3P51805 1871 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 A0A0U1RQF3 1178 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 OATP04181 439 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 ASGR2P07307 311 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 DARSP14868 501 aaKnown RBP15.49■□□□□ 0.07
SAMM50-204ENST00000493161 SETQ01105 290 aaPredicted RBP15.49■□□□□ 0.07
SAMM50-204ENST00000493161 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
SAMM50-204ENST00000493161 LONRF3Q496Y0 759 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 TMEM105Q8N8V8 129 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 MAP7D2Q96T17 732 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 NR2E1Q9Y466 385 aa15.49■□□□□ 0.07
SAMM50-204ENST00000493161 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
SAMM50-204ENST00000493161 ESYT2A0FGR8 921 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 TMEM150BA6NC51 233 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 CXCL14O95715 111 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 CIITAP33076 1130 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 CA8P35219 290 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 BCAR1P56945 870 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 PRKCEQ02156 737 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 RARS2Q5T160 578 aaKnown RBP15.48■□□□□ 0.07
SAMM50-204ENST00000493161 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 REXO1Q8N1G1 1221 aaKnown RBP15.48■□□□□ 0.07
SAMM50-204ENST00000493161 BCL7CQ8WUZ0 217 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-204ENST00000493161 LPPQ93052 612 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 C6orf50Q9HD87 102 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 DISC1Q9NRI5 854 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 SORCS3Q9UPU3 1222 aa15.48■□□□□ 0.07
SAMM50-204ENST00000493161 ZFHX2Q9C0A1 2572 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-204ENST00000493161 WDR81Q562E7 1941 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 MEIS3P2A8K0S8 358 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 MSH4O15457 936 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 GALR2O43603 387 aaPredicted RBP15.47■□□□□ 0.07
SAMM50-204ENST00000493161 CHMP2AO43633 222 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 EPCAMP16422 314 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 TMOD1P28289 359 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 ITIH3Q06033 890 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 MTMR3Q13615 1198 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 CES5AQ6NT32 575 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 VPS52Q8N1B4 723 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 NLRP7Q8WX94 980 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 PHKBQ93100 1093 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 FAM167AQ96KS9 214 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 SCLT1Q96NL6 688 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms