RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ERVFC1P60507 584 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 PLPP4Q5VZY2 271 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 NLRP7Q8WX94 980 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 MRPS27Q92552 414 aaKnown RBP20.05■□□□□ 0.8
YIPF3-208ENST00000490447 MFSD14AQ96MC6 490 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 NCOA5Q9HCD5 579 aaKnown RBP20.05■□□□□ 0.8
YIPF3-208ENST00000490447 LZTS1Q9Y250 596 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
YIPF3-208ENST00000490447 ZNF862O60290 1169 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 GPC3P51654 580 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 PLCB3Q01970 1234 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 KRT17Q04695 432 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 SSRP1Q08945 709 aaKnown RBP20.04■□□□□ 0.8
YIPF3-208ENST00000490447 DUSP6Q16828 381 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 HFE2Q6ZVN8 426 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 LINC01465Q8N7H1 131 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 ZNF668Q96K58 619 aaPredicted RBP20.04■□□□□ 0.8
YIPF3-208ENST00000490447 ZNF558Q96NG5 402 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 TCF25Q9BQ70 676 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 KCNH6Q9H252 994 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 ADAMTS10Q9H324 1103 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 UNC45AQ9H3U1 944 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 FNDC1Q4ZHG4 1894 aaPredicted RBP20.04■□□□□ 0.8
YIPF3-208ENST00000490447 EVPLQ92817 2033 aa20.04■□□□□ 0.8
YIPF3-208ENST00000490447 CPLX1O14810 134 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 UGCGQ16739 394 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 KCNT2Q6UVM3 1135 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 MIER3Q7Z3K6 550 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 ECHDC2Q86YB7 292 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 SLC5A5Q92911 643 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 PHF7Q9BWX1 381 aaPredicted RBP20.03■□□□□ 0.8
YIPF3-208ENST00000490447 NGRNQ9NPE2 291 aaKnown RBP20.03■□□□□ 0.8
YIPF3-208ENST00000490447 SEPT9Q9UHD8 586 aaPredicted RBP20.03■□□□□ 0.8
YIPF3-208ENST00000490447 PCDHA4Q9UN74 947 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 TRIOO75962 3097 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 WDFY4Q6ZS81 3184 aa20.03■□□□□ 0.8
YIPF3-208ENST00000490447 MYH9P35579 1960 aaKnown RBP20.03■□□□□ 0.8
YIPF3-208ENST00000490447 LOC730098B7Z3J9 87 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 FSCN2O14926 492 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 DARSP14868 501 aaKnown RBP20.02■□□□□ 0.8
YIPF3-208ENST00000490447 CDC42EP1Q00587 391 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 Q4G0T1 1027 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 RDM1Q8NG50 284 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 EDAQ92838 391 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 RPGRIP1Q96KN7 1286 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 DACT1Q9NYF0 836 aa20.02■□□□□ 0.8
YIPF3-208ENST00000490447 DNM2P50570 870 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 EVCP57679 992 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 RBM10P98175 930 aaKnown RBP20.02■□□□□ 0.79
YIPF3-208ENST00000490447 MTERF2Q49AM1 385 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 CPLX2Q6PUV4 134 aaKnown RBP20.02■□□□□ 0.79
YIPF3-208ENST00000490447 LRRC55Q6ZSA7 311 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 TMC7Q7Z402 723 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 GJA10Q969M2 543 aa20.02■□□□□ 0.79
YIPF3-208ENST00000490447 MRPL9Q9BYD2 267 aaKnown RBP20.02■□□□□ 0.79
YIPF3-208ENST00000490447 GCOM2Q9BZD3 368 aaPredicted RBP20.02■□□□□ 0.79
YIPF3-208ENST00000490447 MUC6Q6W4X9 2439 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 A0A0U1RQF3 1178 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 PSMD10O75832 226 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 DEXIO95424 95 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 EOMESO95936 686 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 ATF7P17544 494 aaPredicted RBP20.01■□□□□ 0.79
YIPF3-208ENST00000490447 FGFR4P22455 802 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 PBX3P40426 434 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 TECP42680 631 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 XKR3Q5GH77 459 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 LLGL2Q6P1M3 1020 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 VN1R2Q8NFZ6 395 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 FBXL18Q96ME1 805 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 RNF19AQ9NV58 838 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 SPG21Q9NZD8 308 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
YIPF3-208ENST00000490447 TDP2O95551 362 aa20■□□□□ 0.79
YIPF3-208ENST00000490447 SFPQP23246 707 aaKnown RBP eCLIP20■□□□□ 0.79
YIPF3-208ENST00000490447 CA8P35219 290 aa20■□□□□ 0.79
YIPF3-208ENST00000490447 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
YIPF3-208ENST00000490447 BMS1Q14692 1282 aaKnown RBP20■□□□□ 0.79
YIPF3-208ENST00000490447 CBX2Q14781 532 aaPredicted RBP20■□□□□ 0.79
YIPF3-208ENST00000490447 ALYREFQ86V81 257 aaKnown RBP20■□□□□ 0.79
YIPF3-208ENST00000490447 BLIDQ8IZY5 108 aa20■□□□□ 0.79
YIPF3-208ENST00000490447 HELQQ8TDG4 1101 aa20■□□□□ 0.79
YIPF3-208ENST00000490447 ZSWIM6Q9HCJ5 1215 aa20■□□□□ 0.79
YIPF3-208ENST00000490447 HIDE1A8MVS5 230 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 EDIL3O43854 480 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 ALDH7A1P49419 539 aaKnown RBP19.99■□□□□ 0.79
YIPF3-208ENST00000490447 SMC1AQ14683 1233 aaKnown RBP19.99■□□□□ 0.79
YIPF3-208ENST00000490447 TARBP2Q15633 366 aaKnown RBP19.99■□□□□ 0.79
YIPF3-208ENST00000490447 CLLU1OSQ5K130 101 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 GALNT17Q6IS24 598 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 ANKRD54Q6NXT1 300 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 TMEM184AQ6ZMB5 413 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 TRIM67Q6ZTA4 783 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 SUSD6Q92537 303 aa19.99■□□□□ 0.79
YIPF3-208ENST00000490447 NIFKQ9BYG3 293 aaKnown RBP19.99■□□□□ 0.79
YIPF3-208ENST00000490447 INO80BQ9C086 356 aaPredicted RBP19.99■□□□□ 0.79
YIPF3-208ENST00000490447 CHST12Q9NRB3 414 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms