RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CUTAO60888 179 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 OPHN1O60890 802 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 PCDH8O95206 1070 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 MT-CO1P00395 513 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 PFKMP08237 780 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 SARSP49591 514 aaKnown RBP5.29□□□□□ -1.56
CD46-216ENST00000490278 NEK2P51955 445 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
CD46-216ENST00000490278 ZNF124Q15973 351 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD46-216ENST00000490278 PITRM1Q5JRX3 1037 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 TMEM200BQ69YZ2 307 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 BMP8AQ7Z5Y6 402 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 AMOTL1Q8IY63 956 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 OR5AN1Q8NGI8 311 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 RSAD2Q8WXG1 361 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 CHMP4CQ96CF2 233 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 FUBP3Q96I24 572 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD46-216ENST00000490278 FAXDC2Q96IV6 333 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
CD46-216ENST00000490278 Q9UFV3 132 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 TMPRSS11EQ9UL52 423 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 EDARQ9UNE0 448 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
CD46-216ENST00000490278 KLHL18O94889 574 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 CYP1A1P04798 512 aaPredicted RBP5.28□□□□□ -1.56
CD46-216ENST00000490278 LPLP06858 475 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 C8AP07357 584 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 RBP3P10745 1247 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 POLD1P28340 1107 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 MRPS9P82933 396 aaKnown RBP5.28□□□□□ -1.56
CD46-216ENST00000490278 DGKDQ16760 1214 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 CIAPIN1Q6FI81 312 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 ZBTB46Q86UZ6 589 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 IFNL2Q8IZJ0 200 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 ADGRG2Q8IZP9 1017 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 CARFQ8N187 725 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 CDYL2Q8N8U2 506 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 NUDT10Q8NFP7 164 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 NUDT11Q96G61 164 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 HIST1H2AHQ96KK5 128 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 YTHDC1Q96MU7 727 aaKnown RBP5.28□□□□□ -1.56
CD46-216ENST00000490278 HIST1H2AJQ99878 128 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 NOL10Q9BSC4 688 aaKnown RBP5.28□□□□□ -1.56
CD46-216ENST00000490278 SLC13A1Q9BZW2 595 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 TMEM168Q9H0V1 697 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 KCTD10Q9H3F6 313 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 DNAJC28Q9NX36 388 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 KLHL42Q9P2K6 505 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 SYNPO2Q9UMS6 1093 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 USP18Q9UMW8 372 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 PCDHB6Q9Y5E3 794 aa5.28□□□□□ -1.56
CD46-216ENST00000490278 A0A1B0GTL3 188 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 FZD9O00144 591 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 MTHFD2P13995 350 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 CCND1P24385 295 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 GPR15P49685 360 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 KCNQ1P51787 676 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 EPHB1P54762 984 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 LGALS4P56470 323 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 KRT85P78386 507 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 SRSF2Q01130 221 aaKnown RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 MCL1Q07820 350 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 TOP3AQ13472 1001 aaPredicted RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 CLUL1Q15846 466 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 TOR2AQ5JU69 321 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 FAM26FQ5R3K3 315 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 TCERG1LQ5VWI1 586 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 MCTP2Q6DN12 878 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 LYSMD2Q8IV50 215 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 BCL6BQ8N143 479 aaPredicted RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 OR14C36Q8NHC7 312 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 GAB3Q8WWW8 586 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 JDP2Q8WYK2 163 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 SPATA25Q9BR10 227 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 QRSL1Q9H0R6 528 aaKnown RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 PRDM12Q9H4Q4 367 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 SAE1Q9UBE0 346 aaPredicted RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 PRSS50Q9UI38 385 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 CDC42EP3Q9UKI2 254 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 THRAP3Q9Y2W1 955 aaKnown RBP5.27□□□□□ -1.57
CD46-216ENST00000490278 MRFAP1Q9Y605 127 aa5.27□□□□□ -1.57
CD46-216ENST00000490278 KLHL33A6NCF5 533 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 HMGCRP04035 888 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 XPAP23025 273 aaPredicted RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 ETV4P43268 484 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 MTNR1BP49286 362 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 ANTXR2P58335 489 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 PPARAQ07869 468 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 SPIDRQ14159 915 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 TRIM25Q14258 630 aaKnown RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 PCBP2Q15366 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms