RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CSADQ9Y600 493 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 MEIS1O00470 390 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 CLTAP09496 248 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 CTCFP49711 727 aaPredicted RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 APBA1Q02410 837 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 MORC3Q14149 939 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 DTHD1Q6ZMT9 781 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 SND1Q7KZF4 910 aaKnown RBP eCLIP10.7□□□□□ -0.7
NOD1-208ENST00000489614 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 MB21D1Q8N884 522 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 PAGE5Q96GU1 130 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 RBM41Q96IZ5 413 aaKnown RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 CCT8L2Q96SF2 557 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 SH3GL2Q99962 352 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 PYM1Q9BRP8 204 aaKnown RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 PPANQ9NQ55 473 aaKnown RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 E7EVH7 732 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MSH4O15457 936 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 PSMD10O75832 226 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 HOXA13P31271 388 aaPredicted RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 LSP1P33241 339 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 PPP1R7Q15435 360 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 CALCRLQ16602 461 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ECM1Q16610 540 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MCF2L2Q86YR7 1114 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MFN1Q8IWA4 741 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 CCDC47Q96A33 483 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 FGD4Q96M96 766 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ZNF570Q96NI8 536 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ALS2CR12Q96Q35 445 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 HSD3B7Q9H2F3 369 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 BLOC1S4Q9NUP1 217 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 CASP8AP2Q9UKL3 1982 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 B4DLN1 442 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ENC1O14682 589 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 KLRC4O43908 158 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 STX10O60499 249 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ROR2Q01974 943 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ACBD5Q5T8D3 534 aaPredicted RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 MAP1SQ66K74 1059 aaPredicted RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 WDR93Q6P2C0 686 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 SPATS2Q86XZ4 545 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 CUEDC2Q9H467 287 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 HOXC10Q9NYD6 342 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 TMOD4Q9NZQ9 345 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 C15orf41Q9Y2V0 281 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 PP2D1A8MPX8 630 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ZBED4O75132 1171 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 ATP6V1G2O95670 118 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 EDNRBP24530 442 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 EHHADHQ08426 723 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 IL31RAQ8NI17 732 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 RNPC3Q96LT9 517 aaKnown RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 RUFY1Q96T51 708 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 CORO1CQ9ULV4 474 aaPredicted RBP10.69□□□□□ -0.7
NOD1-208ENST00000489614 MAPK8IP1Q9UQF2 711 aa10.69□□□□□ -0.7
NOD1-208ENST00000489614 DNAJC25-GNG10A0A024R161 153 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 ATP4AP20648 1035 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 NLRP12P59046 1061 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 PGM5Q15124 567 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 COBLL1Q53SF7 1204 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 TRIM68Q6AZZ1 485 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 XRRA1Q6P2D8 792 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 RBM12BQ8IXT5 1001 aaKnown RBP10.68□□□□□ -0.7
NOD1-208ENST00000489614 TC2NQ8N9U0 490 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 GORASP1Q9BQQ3 440 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 CYP39A1Q9NYL5 469 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
NOD1-208ENST00000489614 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 CBFA2T2O43439 604 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 ZBTB48P10074 688 aaPredicted RBP10.68□□□□□ -0.7
NOD1-208ENST00000489614 POLE2P56282 527 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 POSTNQ15063 836 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 PLCB4Q15147 1175 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
NOD1-208ENST00000489614 KANK3Q6NY19 840 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 YTHDF3Q7Z739 585 aaKnown RBP10.68□□□□□ -0.7
NOD1-208ENST00000489614 SLFN12Q8IYM2 578 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 TRIML1Q8N9V2 468 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 CHST13Q8NET6 341 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 MED15Q96RN5 788 aa10.68□□□□□ -0.7
NOD1-208ENST00000489614 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms