RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 DMAC2Q9NW81 257 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 HSF2BPO75031 334 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 PPFIA4O75335 1185 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 TNNC1P63316 161 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 SLC30A10Q6XR72 485 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 MIER3Q7Z3K6 550 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 SRLQ86TD4 932 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 VPS36Q86VN1 386 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 LRRC57Q8N9N7 239 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 TSEN2Q8NCE0 465 aaKnown RBP28.46■■■□□ 2.15
HLA-C-208ENST00000487245 TAF4BQ92750 862 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 FRMD4BQ9Y2L6 1034 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 FLOT1O75955 427 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 P4HBP07237 508 aaKnown RBP28.45■■■□□ 2.15
HLA-C-208ENST00000487245 GLI1P08151 1106 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 IRX5P78411 483 aaPredicted RBP28.45■■■□□ 2.15
HLA-C-208ENST00000487245 RPS6KA1Q15418 735 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 ODR4Q5SWX8 454 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 FMNL3Q8IVF7 1028 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 RBM46Q8TBY0 533 aaKnown RBP28.45■■■□□ 2.15
HLA-C-208ENST00000487245 CLEC4DQ8WXI8 215 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 HOOK2Q96ED9 719 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 BCAS3Q9H6U6 928 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 POLD4Q9HCU8 107 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 GCNT4Q9P109 453 aa28.45■■■□□ 2.15
HLA-C-208ENST00000487245 ZBTB39O15060 712 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 HEXIM1O94992 359 aaKnown RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 KIF4AO95239 1232 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 MAPTP10636 758 aaKnown RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 ITGB5P18084 799 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 ALCAMQ13740 583 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 RASA3Q14644 834 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 PPP2R5AQ15172 486 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 SLC9A9Q8IVB4 645 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 PDGFDQ9GZP0 370 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 PIM2Q9P1W9 311 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 WRAP73Q9P2S5 460 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 FERP16591 822 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 POLD1P28340 1107 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 ZC2HC1CQ53FD0 456 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 PCNX4Q63HM2 1172 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 ALKBH5Q6P6C2 394 aaKnown RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 DBR1Q9UK59 544 aaKnown RBP28.44■■■□□ 2.14
HLA-C-208ENST00000487245 UBIAD1Q9Y5Z9 338 aa28.44■■■□□ 2.14
HLA-C-208ENST00000487245 NPEPPSP55786 919 aa28.43■■■□□ 2.14
HLA-C-208ENST00000487245 ACTRT1Q8TDG2 376 aa28.43■■■□□ 2.14
HLA-C-208ENST00000487245 JDP2Q8WYK2 163 aa28.43■■■□□ 2.14
HLA-C-208ENST00000487245 STRA6Q9BX79 667 aa28.43■■■□□ 2.14
HLA-C-208ENST00000487245 KCNH7Q9NS40 1196 aa28.43■■■□□ 2.14
HLA-C-208ENST00000487245 RRP15Q9Y3B9 282 aaKnown RBP28.43■■■□□ 2.14
HLA-C-208ENST00000487245 A6NNZ2 444 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 ZBTB48P10074 688 aaPredicted RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 TGFB2P61812 414 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 MRPS25P82663 173 aaKnown RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 TUBB8Q3ZCM7 444 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 SLFN11Q7Z7L1 901 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 CD302Q8IX05 232 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 WHAMMQ8TF30 809 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 CALR3Q96L12 384 aaKnown RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 HINFPQ9BQA5 517 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 AGPAT3Q9NRZ7 376 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 CTNND1O60716 968 aaKnown RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 HIP1RO75146 1068 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 FDX1P10109 184 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 STAT1P42224 750 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 ZNF280AP59817 542 aaPredicted RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 TKFCQ3LXA3 575 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 IQCKQ8N0W5 287 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 BANK1Q8NDB2 785 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 C1orf131Q8NDD1 294 aaKnown RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 SCFD2Q8WU76 684 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 LMBR1Q8WVP7 490 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 SLC38A10Q9HBR0 1119 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 AGO4Q9HCK5 861 aaKnown RBP28.42■■■□□ 2.14
HLA-C-208ENST00000487245 EPB41L5Q9HCM4 733 aa28.42■■■□□ 2.14
HLA-C-208ENST00000487245 BHMG1C9JSJ3 638 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-208ENST00000487245 LYPLA2O95372 231 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 RPS12P25398 132 aaKnown RBP28.41■■■□□ 2.14
HLA-C-208ENST00000487245 BAG6P46379 1132 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 CARSP49589 748 aaKnown RBP28.41■■■□□ 2.14
HLA-C-208ENST00000487245 SKOR1P84550 965 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 ENOX2Q16206 610 aaKnown RBP28.41■■■□□ 2.14
HLA-C-208ENST00000487245 PADI6Q6TGC4 694 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 TPCN2Q8NHX9 752 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 ZFP91Q96JP5 570 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-208ENST00000487245 RUFY1Q96T51 708 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 KRT12Q99456 494 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 TBC1D22BQ9NU19 505 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 COL20A1Q9P218 1284 aa28.41■■■□□ 2.14
HLA-C-208ENST00000487245 NFIBO00712 420 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 PPP1R37O75864 691 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 FMO5P49326 533 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 GUCY2DQ02846 1103 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.4■■■□□ 2.14
HLA-C-208ENST00000487245 TIPINQ9BVW5 301 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 LARSQ9P2J5 1176 aaKnown RBP28.4■■■□□ 2.14
HLA-C-208ENST00000487245 MYO1CO00159 1063 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 DHX15O43143 795 aaKnown RBP28.4■■■□□ 2.14
HLA-C-208ENST00000487245 H2AFZP0C0S5 128 aa28.4■■■□□ 2.14
HLA-C-208ENST00000487245 ALAS1P13196 640 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms