RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 KRT17Q04695 432 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 ADCK5Q3MIX3 580 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 EFCAB12Q6NXP0 572 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 LRRC71Q8N4P6 559 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 CASP10Q92851 521 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 SPG21Q9NZD8 308 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 TCEAL9Q9UHQ7 104 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZDBF2Q9HCK1 2354 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 EIF4BP23588 611 aaKnown RBP22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 ADD1P35611 737 aaKnown RBP22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 PRR16Q569H4 304 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 CLLU1OSQ5K130 101 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 SLC39A11Q8N1S5 342 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 RNF169Q8NCN4 708 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 ZNF668Q96K58 619 aaPredicted RBP22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 FAM167AQ96KS9 214 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 ZMYND12Q9H0C1 365 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 TSHZ2Q9NRE2 1034 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 HCFC2Q9Y5Z7 792 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 USP34Q70CQ2 3546 aa22.01■■□□□ 1.11
SMPDL3A-202ENST00000487215 TMOD1P28289 359 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 RCAN1P53805 252 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 SMC1AQ14683 1233 aaKnown RBP22■■□□□ 1.11
SMPDL3A-202ENST00000487215 TPRNQ4KMQ1 711 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 MCTP2Q6DN12 878 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 REXO1Q8N1G1 1221 aaKnown RBP22■■□□□ 1.11
SMPDL3A-202ENST00000487215 MRPL43Q8N983 215 aaKnown RBP22■■□□□ 1.11
SMPDL3A-202ENST00000487215 KREMEN2Q8NCW0 462 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 RIPOR3Q96MK2 946 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 POMKQ9H5K3 350 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 C6orf50Q9HD87 102 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 NR2E1Q9Y466 385 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 SAMM50Q9Y512 469 aa22■■□□□ 1.11
SMPDL3A-202ENST00000487215 C2orf71A6NGG8 1288 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 WDR64B1ANS9 1081 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 ZNF862O60290 1169 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 GFRA3O60609 400 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 OATP04181 439 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 GPC3P51654 580 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 TSGA10IPQ3SY00 556 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 ZNF598Q86UK7 904 aaKnown RBP21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 ZNF710Q8N1W2 664 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 HELQQ8TDG4 1101 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 LENG9Q96B70 501 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 ADAM7Q9H2U9 754 aa21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 NAP1L2Q9ULW6 460 aaPredicted RBP21.99■■□□□ 1.11
SMPDL3A-202ENST00000487215 A0A0U1RQF3 1178 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 C2CD4DB7Z1M9 353 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 DARSP14868 501 aaKnown RBP21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 FGFR4P22455 802 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 CIITAP33076 1130 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 METAP2P50579 478 aaKnown RBP eCLIP21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 CES5AQ6NT32 575 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 CCDC12Q8WUD4 166 aaPredicted RBP21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 ATOH1Q92858 354 aaPredicted RBP21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 SNX27Q96L92 541 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 NECTIN4Q96NY8 510 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 IRF2BPLQ9H1B7 796 aa21.98■■□□□ 1.11
SMPDL3A-202ENST00000487215 CLASP2O75122 1294 aaKnown RBP21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 PRKCEQ02156 737 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 ITIH3Q06033 890 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 MTMR3Q13615 1198 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 SCLT1Q96NL6 688 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 DISC1Q9NRI5 854 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 NRBP2Q9NSY0 501 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 SORCS3Q9UPU3 1222 aa21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 MYH9P35579 1960 aaKnown RBP21.97■■□□□ 1.11
SMPDL3A-202ENST00000487215 CCDC196A0A1B0GTZ2 297 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 NT5C1B-RDH14C9J2C7 533 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 H0Y858 1186 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 BRD1O95696 1058 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 EOMESO95936 686 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 GNA11P29992 359 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 CA8P35219 290 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 BCAR1P56945 870 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 KRT32Q14532 448 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 UGCGQ16739 394 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 UBALD2Q8IYN6 164 aa21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 MRPL9Q9BYD2 267 aaKnown RBP21.96■■□□□ 1.11
SMPDL3A-202ENST00000487215 WEE2P0C1S8 567 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 NUBP1P53384 320 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 BMP2KLQ5H9B9 411 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 NLRP7Q8WX94 980 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 SMOC2Q9H3U7 446 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 DACT1Q9NYF0 836 aa21.95■■□□□ 1.1
SMPDL3A-202ENST00000487215 MSH4O15457 936 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 PRPF3O43395 683 aaKnown RBP21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 GALR2O43603 387 aaPredicted RBP21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 CHMP2AO43633 222 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 EDIL3O43854 480 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 CSDE1O75534 798 aaKnown RBP21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 CXCL14O95715 111 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 CPA1P15085 419 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 MTHFRP42898 656 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 ALDH7A1P49419 539 aaKnown RBP21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 FGD1P98174 961 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 TBC1D8BQ0IIM8 1120 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 DRP2Q13474 957 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 RARS2Q5T160 578 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms