RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 LTB4R2Q9NPC1 389 aa14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 PRMT8Q9NR22 394 aaPredicted RBP14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 RNF19AQ9NV58 838 aa14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 CLUHO75153 1309 aa14.09□□□□□ -0.15
ATPAF1-205ENST00000487193 DSPP15924 2871 aaKnown RBP14.08□□□□□ -0.15
ATPAF1-205ENST00000487193 ADAMTS20P59510 1910 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 RRN3P2A6NIE6 340 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 CTSAP10619 480 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 LAMP2P13473 410 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 CLCN4P51793 760 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 MTAPQ13126 283 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 HTR4Q13639 388 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 C19orf48Q6RUI8 117 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 RNF169Q8NCN4 708 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 RXFP3Q9NSD7 469 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
ATPAF1-205ENST00000487193 MYH15Q9Y2K3 1946 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 DOCK8Q8NF50 2099 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 ANHXE9PGG2 379 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 HOXA2O43364 376 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 FOXD2O60548 495 aaPredicted RBP14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 SSBP05455 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 LIMK1P53667 647 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 MRPS9P82933 396 aaKnown RBP14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 PRKCQQ04759 706 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 CCDC6Q16204 474 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 ZKSCAN2Q63HK3 967 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 GET4Q7L5D6 327 aaPredicted RBP14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 C12orf50Q8NA57 414 aaPredicted RBP14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 TMEM40Q8WWA1 233 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 GATA6Q92908 595 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 KLHL5Q96PQ7 755 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 IGF2RP11717 2491 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 MAST4O15021 2626 aa14.07□□□□□ -0.16
ATPAF1-205ENST00000487193 EIF4E1BA6NMX2 242 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 GIPC1O14908 333 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 GPR182O15218 404 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 NCAM2O15394 837 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 ORC4O43929 436 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 SRSF5Q13243 272 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 DDX53Q86TM3 631 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 TMEM173Q86WV6 379 aaPredicted RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 NME8Q8N427 588 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 CLDN23Q96B33 292 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 PPP1R16BQ96T49 567 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 LSM14BQ9BX40 385 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 EMILIN2Q9BXX0 1053 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 JMJD4Q9H9V9 463 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 MAN1C1Q9NR34 630 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 TCP11L1Q9NUJ3 509 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 SMG1Q96Q15 3661 aaKnown RBP14.06□□□□□ -0.16
ATPAF1-205ENST00000487193 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 INPPL1O15357 1258 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 FIBPO43427 364 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 HRO43593 1189 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 ZFYP08048 801 aaPredicted RBP14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 TDGF1P13385 188 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 POLGP54098 1239 aaPredicted RBP14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 PLCB4Q15147 1175 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 CLLU1OSQ5K130 101 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 ODR4Q5SWX8 454 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 PARM1Q6UWI2 310 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 HELQQ8TDG4 1101 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 SMG7Q92540 1137 aaKnown RBP14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 FGF14Q92915 247 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 SMARCAD1Q9H4L7 1026 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 PIDD1Q9HB75 910 aa14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATPAF1-205ENST00000487193 AXIN1O15169 862 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 ZC3H11AO75152 810 aaKnown RBP eCLIP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 RFPL2O75678 378 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 CNPP09543 421 aaKnown RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 RPS9P46781 194 aaKnown RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 NOVA1P51513 510 aaKnown RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 PDZD3Q86UT5 571 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 CMASQ8NFW8 434 aaPredicted RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 TTC14Q96N46 770 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 INPP4AQ96PE3 977 aaPredicted RBP14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 SCNM1Q9BWG6 230 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 WASF3Q9UPY6 502 aa14.04□□□□□ -0.16
ATPAF1-205ENST00000487193 AKAP13Q12802 2813 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 DMXL2Q8TDJ6 3036 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 GCOM1H8Y6P7 765 aaPredicted RBP14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 ANP32CO43423 234 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 RAB11FIP3O75154 756 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 POLR2MP0CAP2 368 aa14.03□□□□□ -0.16
ATPAF1-205ENST00000487193 GHRHRQ02643 423 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms