RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	PMFBP1	Q8TBY8	1022 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	DEF6	Q9H4E7	631 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	BARX1	Q9HBU1	254 aa	Predicted RBP	5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	JADE2	Q9NQC1	790 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SRRD	Q9UH36	339 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SLC4A7	Q9Y6M7	1214 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	GPRASP1	Q5JY77	1395 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ADGRB2	O60241	1585 aa		5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.74	□□□□□ -1.49
SNRNP40-205	ENST00000486941	COL14A1	Q05707	1796 aa	Known RBP	5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ALS2	Q96Q42	1657 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ADGRB1	O14514	1584 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	EIF3A	Q14152	1382 aa	Known RBP	5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ZNF839	A8K0R7	811 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	PABPC1	P11940	636 aa	Known RBP	5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SELENOP	P49908	381 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ANKS3	Q6ZW76	656 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	DCAF4	Q8WV16	495 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	WRNIP1	Q96S55	665 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	CD244	Q9BZW8	370 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	VPS11	Q9H270	941 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	IPPK	Q9H8X2	491 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ING1	Q9UK53	422 aa	Predicted RBP	5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	NRAP	Q86VF7	1730 aa		5.73	□□□□□ -1.49
SNRNP40-205	ENST00000486941	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	FGFR1	P11362	822 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	KLF10	Q13118	480 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	STYK1	Q6J9G0	422 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	NGDN	Q8NEJ9	315 aa	Known RBP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ZNF428	Q96B54	188 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SGSM3	Q96HU1	749 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	TACO1	Q9BSH4	297 aa	Known RBP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	AARSD1	Q9BTE6	412 aa	Known RBP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	MRI	Q9BWK5	157 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	PCED1A	Q9H1Q7	454 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SLC39A2	Q9NP94	309 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	ARHGAP20	Q9P2F6	1191 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	TESMIN	Q9Y4I5	508 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	LRP5	O75197	1615 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	TULP4	Q9NRJ4	1543 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SPATA31A5	Q5VU36	1347 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	SPATA31A7	Q8IWB4	1347 aa		5.72	□□□□□ -1.49
SNRNP40-205	ENST00000486941	RGPD1	P0DJD0	1748 aa		5.71	□□□□□ -1.49
SNRNP40-205	ENST00000486941	CRYBG1	Q9Y4K1	1723 aa		5.71	□□□□□ -1.49
SNRNP40-205	ENST00000486941	RAB3GAP2	Q9H2M9	1393 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	MAFK	O60675	156 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	ENO2	P09104	434 aa	Predicted RBP	5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	GPR85	P60893	370 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	ARID5A	Q03989	594 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941		Q6ZSN1	163 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	SEC61A2	Q9H9S3	476 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	DSE	Q9UL01	958 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TRAF6	Q9Y4K3	522 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	ITSN1	Q15811	1721 aa		5.71	□□□□□ -1.5
SNRNP40-205	ENST00000486941	FAM90A27P	A6NNH2	459 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	MATN2	O00339	956 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	MUSK	O15146	869 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	SOD2	P04179	222 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	CHGB	P05060	677 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	GNAT1	P11488	350 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	GDF5	P43026	501 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	HMGA2	P52926	109 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	KIZ	Q2M2Z5	673 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	NSMF	Q6X4W1	530 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	KCTD1	Q719H9	257 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	RALYL	Q86SE5	291 aa	Known RBP	5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	LRRC37B	Q96QE4	947 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	GML	Q99445	158 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	PRDM11	Q9NQV5	511 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	HS3ST3A1	Q9Y663	406 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	DISP2	A7MBM2	1401 aa		5.7	□□□□□ -1.5
SNRNP40-205	ENST00000486941	THSD7A	Q9UPZ6	1657 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	AGRP	O00253	132 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	CYR61	O00622	381 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	AMY2A	P04746	511 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TCF3	P15923	654 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	AMY2B	P19961	511 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	DNAJA1	P31689	397 aa	Known RBP	5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	RNF151	Q2KHN1	245 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TAX1BP1	Q86VP1	789 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	LMF1	Q96S06	567 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	ZFR2	Q9UPR6	939 aa	Known RBP	5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TCAF1	Q9Y4C2	921 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	SPATA31A1	Q5TZJ5	1347 aa		5.69	□□□□□ -1.5
SNRNP40-205	ENST00000486941	KIAA0232	Q92628	1395 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TNS1	Q9HBL0	1735 aa	Known RBP	5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	FZD7	O75084	574 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	FBXO21	O94952	628 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	SPIRE1	Q08AE8	756 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	DBP	Q10586	325 aa	Predicted RBP	5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	DUSP8	Q13202	625 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TOP3A	Q13472	1001 aa	Predicted RBP	5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	TBR1	Q16650	682 aa		5.68	□□□□□ -1.5
SNRNP40-205	ENST00000486941	NBPF8	Q3BBV2	869 aa		5.68	□□□□□ -1.5

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