RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 VRTNQ9H8Y1 702 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 SH3GLB2Q9NR46 395 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-207ENST00000483969 ESYT2A0FGR8 921 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 PGK1P00558 417 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 C6orf222P0C671 652 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-207ENST00000483969 TGFB3P10600 412 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 NLRP5P59047 1200 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 NKX3-2P78367 333 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 ME3Q16798 604 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 NLRX1Q86UT6 975 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 KLHDC9Q8NEP7 349 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 WASF1Q92558 559 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 DPF3Q92784 378 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 MYO19Q96H55 970 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 KIF2CQ99661 725 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 SENP6Q9GZR1 1112 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-207ENST00000483969 GNEQ9Y223 722 aaKnown RBP10.18□□□□□ -0.78
COL8A1-207ENST00000483969 DDX49Q9Y6V7 483 aaKnown RBP10.18□□□□□ -0.78
COL8A1-207ENST00000483969 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
COL8A1-207ENST00000483969 A6NJR5 290 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 KPNA6O60684 536 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 LGR5O75473 907 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 RARAP10276 462 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 COL6A1P12109 1028 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 CST5P28325 142 aaPredicted RBP10.17□□□□□ -0.78
COL8A1-207ENST00000483969 WEE1P30291 646 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 MCM2P49736 904 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 AP3B2Q13367 1082 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 KCNA10Q16322 511 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 UBE2SQ16763 222 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 PCNX4Q63HM2 1172 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 GALNT17Q6IS24 598 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 TTC9Q92623 222 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 TP53INP1Q96A56 240 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 TBC1D32Q96NH3 1257 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 SSBP4Q9BWG4 385 aaPredicted RBP10.17□□□□□ -0.78
COL8A1-207ENST00000483969 ZMYND12Q9H0C1 365 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 UPF3AQ9H1J1 476 aaKnown RBP10.17□□□□□ -0.78
COL8A1-207ENST00000483969 SH2B1Q9NRF2 756 aaPredicted RBP10.17□□□□□ -0.78
COL8A1-207ENST00000483969 NR2E3Q9Y5X4 410 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 MRVI1Q9Y6F6 885 aa10.17□□□□□ -0.78
COL8A1-207ENST00000483969 SYNRGQ9UMZ2 1314 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 MAFGO15525 162 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 CABYRO75952 493 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 GH1P01241 217 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 CPT1AP50416 773 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 ACLYP53396 1101 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 FSCN1Q16658 493 aaKnown RBP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 CCDC62Q6P9F0 684 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 WFDC8Q8IUA0 241 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 DIS3LQ8TF46 1054 aaKnown RBP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 GTF3C6Q969F1 213 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 CDHR1Q96JP9 859 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 GLT1D1Q96MS3 346 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 RTEL1Q9NZ71 1219 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 VPS54Q9P1Q0 977 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 ZFATQ9P243 1243 aa10.16□□□□□ -0.78
COL8A1-207ENST00000483969 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 DDX41Q9UJV9 622 aaKnown RBP10.16□□□□□ -0.78
COL8A1-207ENST00000483969 MGAMO43451 1857 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 FRMPD4Q14CM0 1322 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 STK36Q9NRP7 1315 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 PLXNB2O15031 1838 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 ADCY6O43306 1168 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 FIBPO43427 364 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 MICAL2O94851 1124 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 ASGR1P07306 291 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 ICAM3P32942 547 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 ZNF76P36508 570 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 MRPS9P82933 396 aaKnown RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 LRP8Q14114 963 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 NEDD9Q14511 834 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 LY6KQ17RY6 165 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 C11orf91Q3C1V1 193 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 JAKMIP3Q5VZ66 844 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 CCSAPQ6IQ19 270 aaPredicted RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 SLC39A5Q6ZMH5 540 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 REXO1Q8N1G1 1221 aaKnown RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 GIMAP8Q8ND71 665 aaPredicted RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 INPP4AQ96PE3 977 aaPredicted RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 LLPHQ9BRT6 129 aaKnown RBP10.15□□□□□ -0.78
COL8A1-207ENST00000483969 SEZ6LQ9BYH1 1024 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.78
COL8A1-207ENST00000483969 ELP1O95163 1332 aa10.14□□□□□ -0.79
COL8A1-207ENST00000483969 CTDNEP1O95476 244 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms