RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PCDH8O95206 1070 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 RPL13P26373 211 aaKnown RBP7.67□□□□□ -1.18
SF3B1-210ENST00000482158 IL13P35225 146 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 MRPS9P82933 396 aaKnown RBP7.67□□□□□ -1.18
SF3B1-210ENST00000482158 CAP1Q01518 475 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 NFATC3Q12968 1075 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 PIN1Q13526 163 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-210ENST00000482158 LRRC41Q15345 812 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 POU5F2Q8N7G0 328 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 ZNF277Q9NRM2 450 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-210ENST00000482158 DNAJC28Q9NX36 388 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 MKS1Q9NXB0 559 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 KCMF1Q9P0J7 381 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 FTSJ1Q9UET6 329 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 PRSS50Q9UI38 385 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
SF3B1-210ENST00000482158 A0A0A6YYK5 440 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-210ENST00000482158 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 MARCH6O60337 910 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 TSPAN15O95858 294 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 AGXTP21549 392 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 ADCY8P40145 1251 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 LGALS4P56470 323 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 WDR72Q3MJ13 1102 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 OR5AN1Q8NGI8 311 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 TSPEARQ8WU66 669 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 JADE3Q92613 823 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 RPGRQ92834 1020 aaKnown RBP7.66□□□□□ -1.18
SF3B1-210ENST00000482158 DACT3Q96B18 629 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-210ENST00000482158 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 SOX7Q9BT81 388 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 MAGEL2Q9UJ55 1249 aa7.66□□□□□ -1.18
SF3B1-210ENST00000482158 ST20-MTHFSA0A0A6YYL1 179 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 SH3D21A4FU49 640 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 TCAF2A6NFQ2 919 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 H0Y858 1186 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 FFAR3O14843 346 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 CYP7B1O75881 506 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 GRAMD4Q6IC98 578 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 TRMT10BQ6PF06 316 aaKnown RBP7.65□□□□□ -1.18
SF3B1-210ENST00000482158 BMP8AQ7Z5Y6 402 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 AMOTL1Q8IY63 956 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 ADGRG2Q8IZP9 1017 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 BHLHE22Q8NFJ8 381 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-210ENST00000482158 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 RHOBTB2Q9BYZ6 727 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 CDH19Q9H159 772 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 TCF7L1Q9HCS4 588 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.65□□□□□ -1.18
SF3B1-210ENST00000482158 ZIM2Q9NZV7 527 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 CHPF2Q9P2E5 772 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 GPR45Q9Y5Y3 372 aa7.65□□□□□ -1.18
SF3B1-210ENST00000482158 A0A1B0GTL3 188 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 KLHL33A6NCF5 533 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 DDX3XO00571 662 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 OSMP13725 252 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 TOP3AQ13472 1001 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 MUM1Q2TAK8 710 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 TTLL7Q6ZT98 887 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 GAREM2Q75VX8 874 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 FMNL3Q8IVF7 1028 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 WDR48Q8TAF3 677 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 TSR2Q969E8 191 aaKnown RBP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 TEKT5Q96M29 485 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 SLC2A13Q96QE2 648 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 SPATA25Q9BR10 227 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 NOL10Q9BSC4 688 aaKnown RBP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 DPP7Q9UHL4 492 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 EVLQ9UI08 416 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 USP18Q9UMW8 372 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 LUC7L2Q9Y383 392 aaKnown RBP7.64□□□□□ -1.19
SF3B1-210ENST00000482158 PCDHB6Q9Y5E3 794 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 CDY2AQ9Y6F7 541 aa7.64□□□□□ -1.19
SF3B1-210ENST00000482158 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 CUTAO60888 179 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 ZRANB2O95218 330 aaKnown RBP eCLIP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 RECQLP46063 649 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 LINC00310P59036 64 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 EIF4HQ15056 248 aaKnown RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 CLUL1Q15846 466 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 TMEM240Q5SV17 173 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 PNMA8AQ86V59 439 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 CMTR2Q8IYT2 770 aaKnown RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 CPA6Q8N4T0 437 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 TP53I13Q8NBR0 393 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 PPP1R14CQ8TAE6 165 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 GAB3Q8WWW8 586 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 RSAD2Q8WXG1 361 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 YTHDC1Q96MU7 727 aaKnown RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 FDXACB1Q9BRP7 624 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-210ENST00000482158 Q9UFV3 132 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 IP6K2Q9UHH9 426 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 CDC42EP3Q9UKI2 254 aa7.63□□□□□ -1.19
SF3B1-210ENST00000482158 E2F8A0AVK6 867 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 XPOTO43592 962 aaKnown RBP7.62□□□□□ -1.19
SF3B1-210ENST00000482158 TSPAN6O43657 245 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms