RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 PIK3CDO00329 1044 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 MAFGO15525 162 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 IBSPP21815 317 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-238ENST00000479894 BMS1Q14692 1282 aaKnown RBP17.68■□□□□ 0.42
HDLBP-238ENST00000479894 RARS2Q5T160 578 aaKnown RBP17.68■□□□□ 0.42
HDLBP-238ENST00000479894 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 CUL5Q93034 780 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 AZI2Q9H6S1 392 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 FBXL21Q9UKT6 434 aa17.68■□□□□ 0.42
HDLBP-238ENST00000479894 NOC2LQ9Y3T9 749 aaKnown RBP17.68■□□□□ 0.42
HDLBP-238ENST00000479894 ZBTB43O43298 467 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 CYTH3O43739 400 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 FGFR1P11362 822 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 SDHBP21912 280 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 EVCP57679 992 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 GRM4Q14833 912 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 MTHFD1LQ6UB35 978 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 OTOP3Q7RTS5 596 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 PLPPR4Q7Z2D5 763 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 SIX5Q8N196 739 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 BRF1Q92994 677 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 PCYT2Q99447 389 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
HDLBP-238ENST00000479894 R4GN57 208 aa17.67■□□□□ 0.42
HDLBP-238ENST00000479894 MYH9P35579 1960 aaKnown RBP17.67■□□□□ 0.42
HDLBP-238ENST00000479894 WEE2P0C1S8 567 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 SMARCA1P28370 1054 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 PLCB4Q15147 1175 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 CPLX2Q6PUV4 134 aaKnown RBP17.66■□□□□ 0.42
HDLBP-238ENST00000479894 ZNF274Q96GC6 653 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-238ENST00000479894 BORCS6Q96GS4 357 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 ZSCAN31Q96LW9 406 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-238ENST00000479894 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 IGSF9Q9P2J2 1179 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 ST3GAL5Q9UNP4 418 aa17.66■□□□□ 0.42
HDLBP-238ENST00000479894 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 MEIS2O14770 477 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 ARP10275 920 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 ITGB5P18084 799 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 TROAPQ12815 778 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 MTMR1Q13613 665 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 GIT2Q14161 759 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 USP17L6PQ6QN14 398 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 SLC39A11Q8N1S5 342 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 FANCBQ8NB91 859 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 KCNK12Q9HB15 430 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-238ENST00000479894 UBIAD1Q9Y5Z9 338 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 IRAK3Q9Y616 596 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 DOCK8Q8NF50 2099 aa17.65■□□□□ 0.42
HDLBP-238ENST00000479894 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.42
HDLBP-238ENST00000479894 CPA1P15085 419 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 SLC26A2P50443 739 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 TBC1D8BQ0IIM8 1120 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 DSC3Q14574 896 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 RSPO4Q2I0M5 234 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-238ENST00000479894 CCDC149Q6ZUS6 474 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 ABI1Q8IZP0 508 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 C12orf76Q8N812 135 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-238ENST00000479894 TRAPPC12Q8WVT3 735 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 TMEM40Q8WWA1 233 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 JPH1Q9HDC5 661 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-238ENST00000479894 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 GINS2Q9Y248 185 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 CHD6Q8TD26 2715 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 GPR179Q6PRD1 2367 aa17.64■□□□□ 0.41
HDLBP-238ENST00000479894 CARNS1A5YM72 827 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 STAT5BP51692 787 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 GPR149Q86SP6 731 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 CDHR5Q9HBB8 845 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-238ENST00000479894 RNF19AQ9NV58 838 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 SLC9A2Q9UBY0 812 aa17.63■□□□□ 0.41
HDLBP-238ENST00000479894 CFAP47Q6ZTR5 3102 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 GOLGA8BA8MQT2 603 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 CDKL5O76039 1030 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 CXCL14O95715 111 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 KLRC1P26715 233 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 PBX3P40426 434 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 METAP2P50579 478 aaKnown RBP eCLIP17.62■□□□□ 0.416e-8■■□□□ 13
HDLBP-238ENST00000479894 CRYBB1P53674 252 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-238ENST00000479894 TOB2Q14106 344 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-238ENST00000479894 RTN1Q16799 776 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 FAM228AQ86W67 206 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 KIAA0319LQ8IZA0 1049 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 GPR161Q8N6U8 529 aaKnown RBP17.62■□□□□ 0.41
HDLBP-238ENST00000479894 TMEM87AQ8NBN3 555 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 SLC22A17Q8WUG5 538 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms