RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 NLGN4XQ8N0W4 816 aa6.9□□□□□ -1.3
SRRM1-210ENST00000474843 CABP5Q9NP86 173 aa6.9□□□□□ -1.3
SRRM1-210ENST00000474843 POLR3AO14802 1390 aaPredicted RBP6.9□□□□□ -1.31
SRRM1-210ENST00000474843 TOPAZ1Q8N9V7 1692 aa6.9□□□□□ -1.31
SRRM1-210ENST00000474843 PHLPP1O60346 1717 aa6.9□□□□□ -1.31
SRRM1-210ENST00000474843 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
SRRM1-210ENST00000474843 CBX4O00257 560 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 RFXAPO00287 272 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 TRAF5O00463 557 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 NUAK1O60285 661 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 NPTXRO95502 500 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 MECP2P51608 486 aaKnown RBP6.89□□□□□ -1.31
SRRM1-210ENST00000474843 SEC23AQ15436 765 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 SEPT7Q16181 437 aaKnown RBP6.89□□□□□ -1.31
SRRM1-210ENST00000474843 PHF19Q5T6S3 580 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
SRRM1-210ENST00000474843 ZBTB8AQ96BR9 441 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 PWWP2AQ96N64 755 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 IRF2BPLQ9H1B7 796 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 WASF3Q9UPY6 502 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 TTC21AQ8NDW8 1320 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 DISP3Q9P2K9 1392 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 ATP7BP35670 1465 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 NHSL1Q5SYE7 1610 aa6.89□□□□□ -1.31
SRRM1-210ENST00000474843 CPSF1Q10570 1443 aaKnown RBP6.88□□□□□ -1.31
SRRM1-210ENST00000474843 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 KTN1Q86UP2 1357 aaKnown RBP6.88□□□□□ -1.31
SRRM1-210ENST00000474843 CCDC7Q96M83 1385 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 KIF7Q2M1P5 1343 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 WASHC2AQ641Q2 1341 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 A0A087X0B3 334 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 GSG1L2A8MUP6 293 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 ITGA1P56199 1179 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 VMACQ2NL98 169 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 LIPIQ6XZB0 460 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 LEO1Q8WVC0 666 aaPredicted RBP6.88□□□□□ -1.31
SRRM1-210ENST00000474843 BOCQ9BWV1 1114 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 MTFR1LQ9H019 292 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 KNSTRNQ9Y448 316 aa6.88□□□□□ -1.31
SRRM1-210ENST00000474843 AHDC1Q5TGY3 1603 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-210ENST00000474843 ANKRD36BQ8N2N9 1353 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 CLASP2O75122 1294 aaKnown RBP6.87□□□□□ -1.31
SRRM1-210ENST00000474843 HIP1RO75146 1068 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 C4BPAP04003 597 aaKnown RBP6.87□□□□□ -1.31
SRRM1-210ENST00000474843 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 PROSER1Q86XN7 944 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 THNSL2Q86YJ6 484 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 PPM1KQ8N3J5 372 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 UBR7Q8N806 425 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 FNIP1Q8TF40 1166 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 PANK3Q9H999 370 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 SLC39A2Q9NP94 309 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.87□□□□□ -1.31
SRRM1-210ENST00000474843 MON2Q7Z3U7 1717 aa6.87□□□□□ -1.31
SRRM1-210ENST00000474843 ARHGEF10O15013 1369 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 TTC21BQ7Z4L5 1316 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 ZBTB48P10074 688 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 GJA4P35212 333 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 AFF3P51826 1226 aaKnown RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 OTOP1Q7RTM1 612 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 CILP2Q8IUL8 1156 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 LRRC56Q8IYG6 542 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 C11orf84Q9BUA3 381 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 NGRNQ9NPE2 291 aaKnown RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-210ENST00000474843 B4GALT6Q9UBX8 382 aa6.86□□□□□ -1.31
SRRM1-210ENST00000474843 USP6P35125 1406 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 EDC4Q6P2E9 1401 aaKnown RBP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 CGNL1Q0VF96 1302 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 MYOM1P52179 1685 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 MMEP08473 750 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 POU3F2P20265 443 aaPredicted RBP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 MC4RP32245 332 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 HSPA1LP34931 641 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 THBS2P35442 1172 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 MASP1P48740 699 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 HTRA3P83110 453 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 ADAM9Q13443 819 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 KYQ8NBH2 561 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 ZNF526Q8TF50 670 aaPredicted RBP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 DDX17Q92841 729 aaKnown RBP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 DACT3Q96B18 629 aaPredicted RBP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.85□□□□□ -1.31
SRRM1-210ENST00000474843 KCNH7Q9NS40 1196 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 ARHGAP28Q9P2N2 729 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
SRRM1-210ENST00000474843 TRPM3Q9HCF6 1732 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-210ENST00000474843 JCADQ9P266 1359 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms