RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 CYP26B1Q9NR63 512 aa22.24■■□□□ 1.15
UBQLN4-203ENST00000472638 RGS18Q9NS28 235 aa22.24■■□□□ 1.15
UBQLN4-203ENST00000472638 BMP2KQ9NSY1 1161 aaPredicted RBP22.24■■□□□ 1.15
UBQLN4-203ENST00000472638 PCDHA12Q9UN75 941 aa22.24■■□□□ 1.15
UBQLN4-203ENST00000472638 TRANK1O15050 2925 aa22.24■■□□□ 1.15
UBQLN4-203ENST00000472638 ZBTB39O15060 712 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 MAFO75444 373 aaPredicted RBP22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 CSDE1O75534 798 aaKnown RBP22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 EIF4BP23588 611 aaKnown RBP22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 DNM2P50570 870 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 GNL2Q13823 731 aaKnown RBP22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 TPH2Q8IWU9 490 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 FBXO18Q8NFZ0 1043 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 TMEM60Q9H2L4 133 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 SUCLA2Q9P2R7 463 aaPredicted RBP22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 KIF3AQ9Y496 699 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 PCDHB7Q9Y5E2 793 aa22.23■■□□□ 1.15
UBQLN4-203ENST00000472638 PRRC2BQ5JSZ5 2229 aaKnown RBP22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 IGKV6-21A0A0C4DH24 114 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 LINC00271P0C7V0 271 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 DARSP14868 501 aaKnown RBP22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 SLC24A5Q71RS6 500 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 RHPN2Q8IUC4 686 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 C4orf19Q8IY42 314 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 EIF2AK1Q9BQI3 630 aaKnown RBP22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 C1orf112Q9NSG2 853 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 LMCD1Q9NZU5 365 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 MRPL42Q9Y6G3 142 aaKnown RBP22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 COL4A6Q14031 1691 aa22.22■■□□□ 1.15
UBQLN4-203ENST00000472638 A0A087WZ62 844 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 C9IYK1 514 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 H3BNC9 293 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 GJB2P29033 226 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 YWHABP31946 246 aaKnown RBP22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 BMPR1AP36894 532 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 TFF2Q03403 129 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 DSC3Q14574 896 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 ZNF174Q15697 407 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 KSR1Q8IVT5 923 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 ZNF710Q8N1W2 664 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 ATXN2LQ8WWM7 1075 aaKnown RBP22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 MTMR9Q96QG7 549 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 FDXACB1Q9BRP7 624 aaPredicted RBP22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 FOXP1Q9H334 677 aaPredicted RBP22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 ZSWIM4Q9H7M6 989 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 FOXD4L1Q9NU39 408 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 TTC3P53804 2025 aa22.21■■□□□ 1.15
UBQLN4-203ENST00000472638 SLITRK3O94933 977 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 POLGP54098 1239 aaPredicted RBP22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 XKR9Q5GH70 373 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 TJAP1Q5JTD0 557 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 OTUD6AQ7L8S5 288 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 CMTR2Q8IYT2 770 aaKnown RBP22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 SLC7A3Q8WY07 619 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 TMEM143Q96AN5 459 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 NLRP4Q96MN2 994 aa22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 JPH2Q9BR39 696 aaPredicted RBP22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 GCOM2Q9BZD3 368 aaPredicted RBP22.2■■□□□ 1.14
UBQLN4-203ENST00000472638 A0A087WWV3 80 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 POTEMA6NI47 508 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 CSPG5O95196 566 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 ZSCAN20P17040 1043 aaPredicted RBP22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 MRPS5P82675 430 aaKnown RBP22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 FAM102BQ5T8I3 360 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 NOSTRINQ8IVI9 506 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 CLP1Q92989 425 aaKnown RBP22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 MRPL38Q96DV4 380 aaKnown RBP22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 ASB2Q96Q27 587 aa22.19■■□□□ 1.14
UBQLN4-203ENST00000472638 TBKBP1A7MCY6 615 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 FGFR1P11362 822 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 RFC5P40937 340 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 FAM189BP81408 668 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 NBR1Q14596 966 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 PTPROQ16827 1216 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 HSD17B14Q9BPX1 270 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 ATP6V0A4Q9HBG4 840 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 RWDD3Q9Y3V2 267 aa22.18■■□□□ 1.14
UBQLN4-203ENST00000472638 REV3LO60673 3130 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 C5orf67F2Z3F1 127 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 GRM6O15303 877 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 RB1P06400 928 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 PDCP20941 246 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 CDC42EP1Q00587 391 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 TTC38Q5R3I4 469 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 FAM43BQ6ZT52 329 aaPredicted RBP22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 RNF169Q8NCN4 708 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 PRPF31Q8WWY3 499 aaKnown RBP22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 C11orf84Q9BUA3 381 aaPredicted RBP22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 DHX33Q9H6R0 707 aaKnown RBP22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 TMEM161AQ9NX61 479 aa22.17■■□□□ 1.14
UBQLN4-203ENST00000472638 OR52Z1P0C646 297 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 SRGAP2CP0DJJ0 459 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 PDIA4P13667 645 aaKnown RBP22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 DDIT3P35638 169 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 TECP42680 631 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 EMC2Q15006 297 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 SPOUT1Q5T280 376 aaKnown RBP22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 ZNF410Q86VK4 478 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 NEK9Q8TD19 979 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms