RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC6A3Q01959 620 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 PRKCQQ04759 706 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 SLC14A2Q15849 920 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 BICRALQ6AI39 1079 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 GALNT18Q6P9A2 607 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 SLC41A1Q8IVJ1 513 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 TRIM48Q8IWZ4 208 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 ANKRD42Q8N9B4 389 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMC5-202ENST00000471372 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
SMC5-202ENST00000471372 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
SMC5-202ENST00000471372 PIM2Q9P1W9 311 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 BTBD7Q9P203 1132 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 L1RE1Q9UN81 338 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 ASB1Q9Y576 335 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 ST20-MTHFSA0A0A6YYL1 179 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 A0A1W2PQJ5 194 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 PIP5K1CO60331 668 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 PFKMP08237 780 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 FOSL1P15407 271 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 FSTP19883 344 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 ITGB7P26010 798 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 HTR1BP28222 390 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 HALP42357 657 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 ADCY2Q08462 1091 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 PAN2Q504Q3 1202 aaKnown RBP8.26□□□□□ -1.09
SMC5-202ENST00000471372 KIAA1841Q6NSI8 718 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 DARS2Q6PI48 645 aaKnown RBP8.26□□□□□ -1.09
SMC5-202ENST00000471372 MILR1Q7Z6M3 343 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 CABP7Q86V35 215 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 COL23A1Q86Y22 540 aaPredicted RBP8.26□□□□□ -1.09
SMC5-202ENST00000471372 DCP2Q8IU60 420 aaKnown RBP8.26□□□□□ -1.09
SMC5-202ENST00000471372 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 SGCZQ96LD1 299 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 ACE2Q9BYF1 805 aaPredicted RBP8.26□□□□□ -1.09
SMC5-202ENST00000471372 TPSG1Q9NRR2 321 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 IPPQ9Y573 584 aa8.26□□□□□ -1.09
SMC5-202ENST00000471372 PRR19A6NJB7 356 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 F5H423 210 aaPredicted RBP8.25□□□□□ -1.09
SMC5-202ENST00000471372 CELA3BP08861 270 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 AOAHP28039 575 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 PEX2P28328 305 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 MC4RP32245 332 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 RGS3P49796 1198 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 BCAR1P56945 870 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 BNIP3Q12983 259 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 RNF220Q5VTB9 566 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 SWSAP1Q6NVH7 229 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 KANSL1Q7Z3B3 1105 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 MARCH10Q8NA82 808 aaPredicted RBP8.25□□□□□ -1.09
SMC5-202ENST00000471372 POF1BQ8WVV4 589 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 NRG4Q8WWG1 115 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 PGBD4Q96DM1 585 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 CCDC138Q96M89 665 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 CGRRF1Q99675 332 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 UCKL1Q9NWZ5 548 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 RTEL1Q9NZ71 1219 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 PRSS50Q9UI38 385 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
SMC5-202ENST00000471372 NPHP1O15259 732 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 GSC2O15499 205 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
SMC5-202ENST00000471372 SPIDRQ14159 915 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 ZFYVE27Q5T4F4 411 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 ZDHHC13Q8IUH4 622 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 NETO2Q8NC67 525 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 ACRBPQ8NEB7 543 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 TMEM59LQ9UK28 342 aa8.24□□□□□ -1.09
SMC5-202ENST00000471372 GOLIM4O00461 696 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 PCDH8O95206 1070 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 FAHP16930 419 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 THBS2P35442 1172 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 AGFG1P52594 562 aaKnown RBP8.23□□□□□ -1.09
SMC5-202ENST00000471372 HK2P52789 917 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 CYP4F8P98187 520 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 PPARAQ07869 468 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 DBPQ10586 325 aaPredicted RBP8.23□□□□□ -1.09
SMC5-202ENST00000471372 MALLQ13021 153 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 KRT72Q14CN4 511 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 CNN3Q15417 329 aaKnown RBP8.23□□□□□ -1.09
SMC5-202ENST00000471372 ADRM1Q16186 407 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 ANO4Q32M45 955 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 TTLL11Q8NHH1 800 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 FOXB1Q99853 325 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 HERPUD2Q9BSE4 406 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 CDY2AQ9Y6F7 541 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 MYPNQ86TC9 1320 aa8.23□□□□□ -1.09
SMC5-202ENST00000471372 CAPN8A6NHC0 703 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 NFIBO00712 420 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 MPIG6BO95866 241 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 FUT4P22083 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms