RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 GALCP54803 685 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 HLTFQ14527 1009 aaKnown RBP eCLIP11.34□□□□□ -0.59
UFD1-206ENST00000466373 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
UFD1-206ENST00000466373 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 DDX47Q9H0S4 455 aaKnown RBP11.34□□□□□ -0.59
UFD1-206ENST00000466373 GDF3Q9NR23 364 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 COL20A1Q9P218 1284 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 F8VZ95 297 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 NFIBO00712 420 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 TRIM66O15016 1216 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
UFD1-206ENST00000466373 INPP5BP32019 993 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
UFD1-206ENST00000466373 TEKT3Q9BXF9 490 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 FRMPD4Q14CM0 1322 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 K7ENM7 598 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 ITGA4P13612 1032 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 DLG4P78352 724 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 TTMPQ5BVD1 217 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 C10orf76Q5T2E6 689 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
UFD1-206ENST00000466373 PALB2Q86YC2 1186 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 ZSWIM2Q8NEG5 633 aa11.34□□□□□ -0.59
UFD1-206ENST00000466373 ZNF646O15015 1829 aaPredicted RBP11.34□□□□□ -0.59
UFD1-206ENST00000466373 SOX5P35711 763 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 TNNC1P63316 161 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
UFD1-206ENST00000466373 PAK2Q13177 524 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 PADI6Q6TGC4 694 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 DAW1Q8N136 415 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 TAS2R14Q9NYV8 317 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 NOC2LQ9Y3T9 749 aaKnown RBP11.33□□□□□ -0.6
UFD1-206ENST00000466373 IVLP07476 585 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 FERP16591 822 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
UFD1-206ENST00000466373 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 CFAP58Q5T655 872 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 C10orf67Q8IYJ2 551 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 INTS2Q9H0H0 1204 aaKnown RBP11.33□□□□□ -0.6
UFD1-206ENST00000466373 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
UFD1-206ENST00000466373 IGSF9BQ9UPX0 1349 aa11.33□□□□□ -0.6
UFD1-206ENST00000466373 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 CAP2P40123 477 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 MYL7Q01449 175 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 PRPF4BQ13523 1007 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 PHLDB3Q6NSJ2 640 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 MXRA8Q9BRK3 442 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 AMACRQ9UHK6 382 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 ZNF233A6NK53 670 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 FOXN3O00409 490 aaPredicted RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 KRIT1O00522 736 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 OPA1O60313 960 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 ALAS1P13196 640 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 USP8P40818 1118 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 ZNF131P52739 623 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 TRAF1Q13077 416 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 MAPK7Q13164 816 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 RUBCNQ92622 972 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 CBWD1Q9BRT8 395 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 STK33Q9BYT3 514 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 GPR88Q9GZN0 384 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 CENPHQ9H3R5 247 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 EHMT1Q9H9B1 1298 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 FBXL5Q9UKA1 691 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 RRP15Q9Y3B9 282 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 PGRMC1O00264 195 aaKnown RBP11.32□□□□□ -0.6
UFD1-206ENST00000466373 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 COPB2P35606 906 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 GCLMP48507 274 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 BFSP1Q12934 665 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 ALS2CLQ60I27 953 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 GPRC5CQ9NQ84 441 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 TMEM59LQ9UK28 342 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 PPP1R9AQ9ULJ8 1098 aa11.32□□□□□ -0.6
UFD1-206ENST00000466373 EMSYQ7Z589 1322 aa11.31□□□□□ -0.6
UFD1-206ENST00000466373 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms