RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
USP39-212ENST00000465514 ATP9AO75110 1047 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 FGFR1P11362 822 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 RXRAP19793 462 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 MCM5P33992 734 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 CA8P35219 290 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 GNAQP50148 359 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 IGBP1P78318 339 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 DMWDQ09019 674 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 COL9A3Q14050 684 aaPredicted RBP11.13□□□□□ -0.63
USP39-212ENST00000465514 PPM1JQ5JR12 505 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 CCDC149Q6ZUS6 474 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 TMTC2Q8N394 836 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 MRPL43Q8N983 215 aaKnown RBP11.13□□□□□ -0.63
USP39-212ENST00000465514 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
USP39-212ENST00000465514 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
USP39-212ENST00000465514 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 WNT16Q9UBV4 365 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 MYH15Q9Y2K3 1946 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 KCNA2P16389 499 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 EPCAMP16422 314 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 ITGB5P18084 799 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 PPM1AP35813 382 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
USP39-212ENST00000465514 KRT17Q04695 432 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 TMC5Q6UXY8 1006 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 MAML2Q8IZL2 1156 aaPredicted RBP11.12□□□□□ -0.63
USP39-212ENST00000465514 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 LSG1Q9H089 658 aaKnown RBP11.12□□□□□ -0.63
USP39-212ENST00000465514 USP18Q9UMW8 372 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 SIT1Q9Y3P8 196 aa11.12□□□□□ -0.63
USP39-212ENST00000465514 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
USP39-212ENST00000465514 COL4A3Q01955 1670 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 IGF2RP11717 2491 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 WDFY3Q8IZQ1 3526 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 SLC27A2O14975 620 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 SPTLC1O15269 473 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 CALM1P0DP23 149 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 CALM2P0DP24 149 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 CALM3P0DP25 149 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 LIFRP42702 1097 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
USP39-212ENST00000465514 UBE2SQ16763 222 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 CCDC82Q8N4S0 544 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
USP39-212ENST00000465514 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 ZNF558Q96NG5 402 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 ADAM2Q99965 735 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
USP39-212ENST00000465514 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 IGSF9Q9P2J2 1179 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
USP39-212ENST00000465514 UBIAD1Q9Y5Z9 338 aa11.11□□□□□ -0.63
USP39-212ENST00000465514 C9IYK1 514 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
USP39-212ENST00000465514 GLULP15104 373 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 MTMR1Q13613 665 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 CREB3L3Q68CJ9 461 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 GLG1Q92896 1179 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 ESYT1Q9BSJ8 1104 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 RGS18Q9NS28 235 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 C1orf112Q9NSG2 853 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 SPG21Q9NZD8 308 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
USP39-212ENST00000465514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.09□□□□□ -0.63
USP39-212ENST00000465514 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
USP39-212ENST00000465514 LRRN2O75325 713 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 GABBR2O75899 941 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 TGM1P22735 817 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 KRT76Q01546 638 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 NECTIN1Q15223 517 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 PHLDB3Q6NSJ2 640 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 CABP7Q86V35 215 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 PJA1Q8NG27 643 aa11.09□□□□□ -0.63
USP39-212ENST00000465514 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms