RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
XRN1-204ENST00000465074 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
XRN1-204ENST00000465074 CTNNB1P35222 781 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 TECP42680 631 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 GPC3P51654 580 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 GPM6BQ13491 265 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 NBR1Q14596 966 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 TTC38Q5R3I4 469 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
XRN1-204ENST00000465074 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 NOSTRINQ8IVI9 506 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 LINC01465Q8N7H1 131 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 SLC7A3Q8WY07 619 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 ADAMTS10Q9H324 1103 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 TTC3P53804 2025 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 REV3LO60673 3130 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
XRN1-204ENST00000465074 UNC80Q8N2C7 3258 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 ARID2Q68CP9 1835 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 A0A087WZ62 844 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 POTEMA6NI47 508 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 H3BQV1 296 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 MAFO75444 373 aaPredicted RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 DGKIO75912 1065 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 SLITRK3O94933 977 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 SRGAP2CP0DJJ0 459 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 EIF4BP23588 611 aaKnown RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 GJB2P29033 226 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 SPIRE1Q08AE8 756 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 SAMD11Q96NU1 681 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 MTMR9Q96QG7 549 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 JPH2Q9BR39 696 aaPredicted RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 FDXACB1Q9BRP7 624 aaPredicted RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 GCOM2Q9BZD3 368 aaPredicted RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 RGS18Q9NS28 235 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
XRN1-204ENST00000465074 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
XRN1-204ENST00000465074 RALGAPA2Q2PPJ7 1873 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 LPXNO60711 386 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 OR52Z1P0C646 297 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 DARSP14868 501 aaKnown RBP13.62□□□□□ -0.23
XRN1-204ENST00000465074 MCM2P49736 904 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 C4orf19Q8IY42 314 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
XRN1-204ENST00000465074 A0A0C4DFX4 3053 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 FGFR1P11362 822 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 RFC5P40937 340 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 CDC42EP1Q00587 391 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 EMC2Q15006 297 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 MAEAQ7L5Y9 396 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 PRPF31Q8WWY3 499 aaKnown RBP13.61□□□□□ -0.23
XRN1-204ENST00000465074 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 COL4A3BPQ9Y5P4 624 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
XRN1-204ENST00000465074 KIAA1671Q9BY89 1806 aa13.61□□□□□ -0.23
XRN1-204ENST00000465074 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 C9IYK1 514 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 H3BNC9 293 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 BMPR1AP36894 532 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 TFF2Q03403 129 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 DSC3Q14574 896 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 PTPROQ16827 1216 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 TWF2Q6IBS0 349 aaKnown RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 CATSPER4Q7RTX7 472 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 CMTR2Q8IYT2 770 aaKnown RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 ABI1Q8IZP0 508 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 ERMNQ8TAM6 284 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 NEK9Q8TD19 979 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 MTRQ99707 1265 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 HSD17B14Q9BPX1 270 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 PIN4Q9Y237 131 aaKnown RBP13.6□□□□□ -0.23
XRN1-204ENST00000465074 PCDHB6Q9Y5E3 794 aa13.6□□□□□ -0.23
XRN1-204ENST00000465074 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
XRN1-204ENST00000465074 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
XRN1-204ENST00000465074 U2AF2P26368 475 aaKnown RBP eCLIP13.59□□□□□ -0.23
XRN1-204ENST00000465074 LAMTOR4Q0VGL1 99 aa13.59□□□□□ -0.23
XRN1-204ENST00000465074 PTGDRQ13258 359 aa13.59□□□□□ -0.23
XRN1-204ENST00000465074 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
XRN1-204ENST00000465074 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms