RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ORAI2Q96SN7 254 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SH3GL3Q99963 347 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 TMEM109Q9BVC6 243 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 GRIP2Q9C0E4 1043 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NT5C3AQ9H0P0 336 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 GLT8D2Q9H1C3 349 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 CD248Q9HCU0 757 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 CUEDC1Q9NWM3 386 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SUCLA2Q9P2R7 463 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 DUSP10Q9Y6W6 482 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NUP98P52948 1817 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ESYT2A0FGR8 921 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 RASSF10A6NK89 507 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 KRIT1O00522 736 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 KCNK3O14649 394 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PPIP5K2O43314 1243 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 RAD51CO43502 376 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CEP104O60308 925 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PPFIA2O75334 1257 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 NEBLO76041 1014 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SUN1O94901 812 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ATP6V1G2O95670 118 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 NUDT17P0C025 328 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 IL6STP40189 918 aaPredicted RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SLC1A4P43007 532 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PDE6CP51160 858 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PMS1P54277 932 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SH3BGRP55822 239 aaPredicted RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SARNPP82979 210 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ATP11AP98196 1134 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CLN3Q13286 438 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 UBE4AQ14139 1066 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PPP1R7Q15435 360 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 IL17AQ16552 155 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 FAM83BQ5T0W9 1011 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ERMARDQ5T6L9 678 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 KRT26Q7Z3Y9 468 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PEX26Q7Z412 305 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CCDC65Q8IXS2 484 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CMTR1Q8N1G2 835 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PHTF2Q8N3S3 785 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PIK3R5Q8WYR1 880 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 RAPGEF5Q92565 580 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 GRAMD1AQ96CP6 724 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 FMO2Q99518 471 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CARD10Q9BWT7 1032 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ROPN1BQ9BZX4 212 aaPredicted RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 EHD4Q9H223 541 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ROPN1Q9HAT0 212 aaPredicted RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 NOD2Q9HC29 1040 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 BARHL2Q9NY43 387 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 BCCIPQ9P287 314 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 CTNNAL1Q9UBT7 734 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 SEC63Q9UGP8 760 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 FBXL5Q9UKA1 691 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 TPX2Q9ULW0 747 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PCDHA6Q9UN73 950 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 LEMD3Q9Y2U8 911 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 PCDHA8Q9Y5H6 950 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 A0A1B0GUL6 1792 aa7.81□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF804BA4D1E1 1349 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 PODXLO00592 558 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 CETN3O15182 167 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RGS16O15492 202 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 PRKAB2O43741 272 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 PPP1R12BO60237 982 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 CTNND1O60716 968 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 H2AFZP0C0S5 128 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 FERP16591 822 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 LMNB1P20700 586 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 DRD4P21917 467 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RPL13P26373 211 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 CXCR5P32302 372 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 SKIV2L2P42285 1042 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 SEC24CP53992 1094 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 GSTO1P78417 241 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 MAP2K1Q02750 393 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 GFPT1Q06210 699 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 EHHADHQ08426 723 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 STK4Q13043 487 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RBBP5Q15291 538 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 EDRF1Q3B7T1 1238 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 TLDC1Q6P9B6 456 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 H2AFVQ71UI9 128 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 KLHL7Q8IXQ5 586 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RASGEF1CQ8N431 466 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 SMCR8Q8TEV9 937 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms