RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 RAB34Q9BZG1 259 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 ZSWIM4Q9H7M6 989 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 TUFT1Q9NNX1 390 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 ARID2Q68CP9 1835 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 TMEM150BA6NC51 233 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 VWA3AA6NCI4 1184 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 PP2D1A8MPX8 630 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 RPA1P27694 616 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 SSTR3P32745 418 aaPredicted RBP23.28■■□□□ 1.32
CD58-204ENST00000464088 MRE11P49959 708 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 IGBP1P78318 339 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 GRIN1Q05586 938 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 IKBKEQ14164 716 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 TRMT1LQ7Z2T5 733 aaKnown RBP23.28■■□□□ 1.32
CD58-204ENST00000464088 TPH2Q8IWU9 490 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 LINC00301Q8NCQ3 95 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 ERMNQ8TAM6 284 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 ZBTB10Q96DT7 871 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 MMTAG2Q9BU76 263 aaKnown RBP23.28■■□□□ 1.32
CD58-204ENST00000464088 TFIP11Q9UBB9 837 aaKnown RBP23.28■■□□□ 1.32
CD58-204ENST00000464088 TUBE1Q9UJT0 475 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 WDFY4Q6ZS81 3184 aa23.28■■□□□ 1.32
CD58-204ENST00000464088 TCHHQ07283 1943 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 NUCB2P80303 420 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 ATL3Q6DD88 541 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 TRAF7Q6Q0C0 670 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 MTHFD1LQ6UB35 978 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 RUFY4Q6ZNE9 571 aa23.27■■□□□ 1.32
CD58-204ENST00000464088 DAXXQ9UER7 740 aaPredicted RBP23.27■■□□□ 1.32
CD58-204ENST00000464088 FBXO2Q9UK22 296 aaPredicted RBP23.27■■□□□ 1.32
CD58-204ENST00000464088 MICAL3Q7RTP6 2002 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 DDX11L8A8MPP1 907 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 ZBTB39O15060 712 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 C22orf31O95567 290 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 YEATS4O95619 227 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 KLRC1P26715 233 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 CDC25AP30304 524 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 DNM1Q05193 864 aaKnown RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 ECM1Q16610 540 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 FOXD4L6Q3SYB3 417 aaPredicted RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 HAUS3Q68CZ6 603 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 FOXD4L3Q6VB84 417 aaPredicted RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 SEPT9Q9UHD8 586 aaPredicted RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 INSL6Q9Y581 213 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 PCDHA2Q9Y5H9 948 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 SRPRBQ9Y5M8 271 aaKnown RBP23.26■■□□□ 1.31
CD58-204ENST00000464088 STK24Q9Y6E0 443 aa23.26■■□□□ 1.31
CD58-204ENST00000464088 MUTP22033 750 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 YWHABP31946 246 aaKnown RBP23.25■■□□□ 1.31
CD58-204ENST00000464088 NHLH1Q02575 133 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 MKRN4PQ13434 485 aaPredicted RBP23.25■■□□□ 1.31
CD58-204ENST00000464088 CSPP1Q1MSJ5 1256 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 TAF2Q6P1X5 1199 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 RPAINQ86UA6 219 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 FBXO22Q8NEZ5 403 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 SNX29Q8TEQ0 813 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 MRPL38Q96DV4 380 aaKnown RBP23.25■■□□□ 1.31
CD58-204ENST00000464088 AK8Q96MA6 479 aa23.25■■□□□ 1.31
CD58-204ENST00000464088 DCXO43602 365 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 LONP1P36776 959 aaKnown RBP23.24■■□□□ 1.31
CD58-204ENST00000464088 CCT6AP40227 531 aaKnown RBP23.24■■□□□ 1.31
CD58-204ENST00000464088 NPEPPSP55786 919 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 HTRA4P83105 476 aaPredicted RBP23.24■■□□□ 1.31
CD58-204ENST00000464088 STK38Q15208 465 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 LINC01465Q8N7H1 131 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 ZNF579Q8NAF0 562 aaKnown RBP23.24■■□□□ 1.31
CD58-204ENST00000464088 SP7Q8TDD2 431 aaPredicted RBP23.24■■□□□ 1.31
CD58-204ENST00000464088 CHAMP1Q96JM3 812 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 SH2D3AQ9BRG2 576 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 C17orf80Q9BSJ5 609 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 CYP26B1Q9NR63 512 aa23.24■■□□□ 1.31
CD58-204ENST00000464088 SMIM35A0A1B0GVV1 85 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 MAGEB2O15479 319 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 XRCC6P12956 609 aaKnown RBP eCLIP23.23■■□□□ 1.31
CD58-204ENST00000464088 MBTPS1Q14703 1052 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 COL19A1Q14993 1142 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 MTERF2Q49AM1 385 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 HYIQ5T013 277 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 KRT79Q5XKE5 535 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 POTEGQ6S5H5 508 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 ANKEF1Q9NU02 776 aa23.23■■□□□ 1.31
CD58-204ENST00000464088 CIZ1Q9ULV3 898 aaPredicted RBP23.23■■□□□ 1.31
CD58-204ENST00000464088 A0A087WWV3 80 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 IGKV6-21A0A0C4DH24 114 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 SPTLC2O15270 562 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 CAND2O75155 1236 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 PPP6R2O75170 966 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 PTPROQ16827 1216 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 ZNF618Q5T7W0 954 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 FAM117BQ6P1L5 589 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 OTUD6AQ7L8S5 288 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 PIGOQ8TEQ8 1089 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 FBXL18Q96ME1 805 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 SAMD11Q96NU1 681 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 CSRNP2Q9H175 543 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 PRKAG3Q9UGI9 489 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 CFAP45Q9UL16 551 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms