RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 NLRP11P59045 1033 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 PRKCEQ02156 737 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 PPP2R5CQ13362 524 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 CAMK1Q14012 370 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 UGCGQ16739 394 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 INF2Q27J81 1249 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 TCEAL5Q5H9L2 206 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 MIER3Q7Z3K6 550 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 WASF1Q92558 559 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 GJA10Q969M2 543 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 PABPC5Q96DU9 382 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 OSMRQ99650 979 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 NAP1L4Q99733 375 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 TMEM161AQ9NX61 479 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 ORC3Q9UBD5 711 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 LRFN2Q9ULH4 789 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 PCDHB7Q9Y5E2 793 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 BRWD1Q9NSI6 2320 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 DENND3A2RUS2 1198 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 CHMP2AO43633 222 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 SLC37A4O43826 429 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 MMP1P03956 469 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 DARSP14868 501 aaKnown RBP10.3□□□□□ -0.76
BRCA1-207ENST00000461798 GPC3P51654 580 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 PSMC5P62195 406 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 ME3Q16798 604 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 LETM2Q2VYF4 491 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 TRMT1LQ7Z2T5 733 aaKnown RBP10.3□□□□□ -0.76
BRCA1-207ENST00000461798 NEK8Q86SG6 692 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 LRRC71Q8N4P6 559 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 OXER1Q8TDS5 423 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 HAS1Q92839 578 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 GJB4Q9NTQ9 266 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 VAV3Q9UKW4 847 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 AKT3Q9Y243 479 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
BRCA1-207ENST00000461798 COL4A4P53420 1690 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-207ENST00000461798 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 EML1O00423 815 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 DKC1O60832 514 aaKnown RBP eCLIP10.29□□□□□ -0.76
BRCA1-207ENST00000461798 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-207ENST00000461798 ITGB1P05556 798 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 KCNA5P22460 613 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 LTBRP36941 435 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 QARSP47897 775 aaKnown RBP10.29□□□□□ -0.76
BRCA1-207ENST00000461798 GATMP50440 423 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 UBE3AQ05086 875 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 EPHA7Q15375 998 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 FAM102BQ5T8I3 360 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 ANO5Q75V66 913 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 NECAB1Q8N987 351 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 KLHL23Q8NBE8 558 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 TNFRSF25Q93038 417 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 TRAIPQ9BWF2 469 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 ATP6V0A4Q9HBG4 840 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
BRCA1-207ENST00000461798 CHST12Q9NRB3 414 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
BRCA1-207ENST00000461798 A0A0U1RQF3 1178 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 HOXA2O43364 376 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 EOMESO95936 686 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 P4HBP07237 508 aaKnown RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 ZSCAN20P17040 1043 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 DNAJB1P25685 340 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 DNM2P50570 870 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 NEK4P51957 841 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 HYAL1Q12794 435 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 DRP2Q13474 957 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 PAN2Q504Q3 1202 aaKnown RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 EARS2Q5JPH6 523 aaKnown RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 PTCRAQ6ISU1 281 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 PIK3AP1Q6ZUJ8 805 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 FAM178BQ8IXR5 827 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 SLFN12Q8IYM2 578 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 NSUN7Q8NE18 718 aaKnown RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 PPP1R16BQ96T49 567 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 TMEM117Q9H0C3 514 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 AAASQ9NRG9 546 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 RNF19AQ9NV58 838 aa10.28□□□□□ -0.76
BRCA1-207ENST00000461798 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-207ENST00000461798 RALGAPA2Q2PPJ7 1873 aa10.27□□□□□ -0.76
BRCA1-207ENST00000461798 MYO7AQ13402 2215 aa10.27□□□□□ -0.76
BRCA1-207ENST00000461798 REV3LO60673 3130 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms