RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 FRS2Q8WU20 508 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 ATP6V0A1Q93050 837 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 CNOT6LQ96LI5 555 aaKnown RBP10.43□□□□□ -0.74
LINC01940-201ENST00000455228 TCF12Q99081 682 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 SNX12Q9UMY4 172 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 CNTNAP5Q8WYK1 1306 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 USP17L12C9JPN9 530 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 USP17L21D6R901 530 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 NDUFB5O43674 189 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 NMT2O60551 498 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 ASLP04424 464 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 DYNLL1P63167 89 aaKnown RBP10.43□□□□□ -0.74
LINC01940-201ENST00000455228 PDE4DQ08499 809 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 NDUFA5Q16718 116 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 DEPDC1Q5TB30 811 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 IRGCQ6NXR0 463 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 LVRNQ6Q4G3 990 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 C2CD5Q86YS7 1000 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 PRELID1Q9Y255 219 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 SPATA31A3Q5VYP0 1347 aa10.43□□□□□ -0.74
LINC01940-201ENST00000455228 TSPY2A6NKD2 308 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SH3BP5O60239 455 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 CLK1P49759 484 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 ASIC1P78348 528 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 APBA1Q02410 837 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MECOMQ03112 1051 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 ITIH3Q06033 890 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 COG2Q14746 738 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 PDCD4Q53EL6 469 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 CCDC121Q6ZUS5 278 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SPATA4Q8NEY3 305 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 WDR66Q8TBY9 1149 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SLC16A10Q8TF71 515 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 WDR60Q8WVS4 1066 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 FGD4Q96M96 766 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SRPK1Q96SB4 655 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 DMGDHQ9UI17 866 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 WNK3Q9BYP7 1800 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MTTPP55157 894 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 PFKFB3Q16875 520 aaPredicted RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 AGAP9Q5VTM2 703 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 C8orf74Q6P047 294 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 ZNF662Q6ZS27 426 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 UIMC1Q96RL1 719 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 EPB41L1Q9H4G0 881 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MMRN2Q9H8L6 949 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 PARVGQ9HBI0 331 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 FAM207AQ9NSI2 230 aaPredicted RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SERPINB7O75635 380 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MTA2O94776 668 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MOCS3O95396 460 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 EPHB4P54760 987 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 GLE1Q53GS7 698 aaKnown RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 SYDE2Q5VT97 1194 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 TTI2Q6NXR4 508 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 ZNF572Q7Z3I7 529 aaPredicted RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 GIMAP8Q8ND71 665 aaPredicted RBP10.42□□□□□ -0.74
LINC01940-201ENST00000455228 P2RX5Q93086 422 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 MLXIPQ9HAP2 919 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 PCDHGB3Q9Y5G1 929 aa10.42□□□□□ -0.74
LINC01940-201ENST00000455228 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 IQCA1LA6NCM1 817 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 PEX14O75381 377 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 VEGFAP15692 232 aaPredicted RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 TCP1P17987 556 aaKnown RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 GYG1P46976 350 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 DNA2P51530 1060 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 DDB1Q16531 1140 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 FAM209AQ5JX71 171 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 NFRKBQ6P4R8 1299 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 CREG2Q8IUH2 290 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 MMGT1Q8N4V1 131 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 CYFIP2Q96F07 1278 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 HYOU1Q9Y4L1 999 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 PCDHA13Q9Y5I0 950 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 TNS2Q63HR2 1409 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 SGTAO43765 313 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 PLEKP08567 350 aaPredicted RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 CCNE1P24864 410 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 ATP1A2P50993 1020 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 CHRNDQ07001 517 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 NNTQ13423 1086 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 TTMPQ5BVD1 217 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 KCTD16Q68DU8 428 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 ANKRD13CQ8N6S4 541 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 GBA3Q9H227 469 aa10.41□□□□□ -0.74
LINC01940-201ENST00000455228 DHX36Q9H2U1 1008 aaKnown RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
LINC01940-201ENST00000455228 ACAD8Q9UKU7 415 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms